RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 EPS8L3Q8TE67 593 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 OSTF1Q92882 214 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 OTUB1Q96FW1 271 aaPredicted RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 KLHL15Q96M94 604 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 ACTR6Q9GZN1 396 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 TMEM185BQ9H7F4 350 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 ZCCHC3Q9NUD5 404 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF701Q9NV72 531 aaPredicted RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 TRAF6Q9Y4K3 522 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
CKS1B-202ENST00000368436 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 TRIM64BA6NI03 449 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 SMIM23A6NLE4 172 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 EFNA2O43921 213 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 NPHS1O60500 1241 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 PLAUP00749 431 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 TUBBP07437 444 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 CHRNGP07510 517 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
CKS1B-202ENST00000368436 EFNA1P20827 205 aaPredicted RBP14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ME2P23368 584 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ADH6P28332 368 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 SHC1P29353 583 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 CARD18P57730 90 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF117Q03924 483 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 LASP1Q14847 261 aaKnown RBP14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF239Q16600 458 aaKnown RBP14.29□□□□□ -0.12
CKS1B-202ENST00000368436 CDC73Q6P1J9 531 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 DDIASQ8IXT1 998 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF611Q8N823 705 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 PSMA8Q8TAA3 256 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 TWIST2Q8WVJ9 160 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 JADE3Q92613 823 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 CDS1Q92903 461 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 ICAM5Q9UMF0 924 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 FREM1Q5H8C1 2179 aa14.29□□□□□ -0.12
CKS1B-202ENST00000368436 TMEM114B3SHH9 223 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 TMEM233B4DJY2 109 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 PIP5K1BO14986 540 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 SCAMP2O15127 329 aaKnown RBP14.28□□□□□ -0.12
CKS1B-202ENST00000368436 PABPC4LP0CB38 370 aaKnown RBP14.28□□□□□ -0.12
CKS1B-202ENST00000368436 ELK4P28324 431 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 HPCAL1P37235 193 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 RPL3P39023 403 aaKnown RBP14.28□□□□□ -0.12
CKS1B-202ENST00000368436 FOXF1Q12946 379 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 KLHL26Q53HC5 615 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 ARL13AQ5H913 290 aaPredicted RBP14.28□□□□□ -0.12
CKS1B-202ENST00000368436 WFDC8Q8IUA0 241 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 GABRG1Q8N1C3 465 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 OR7A2PQ8NGA2 310 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 PHOSPHO1Q8TCT1 267 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 NUDT8Q8WV74 236 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 TMEM171Q8WVE6 324 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 ROBO4Q8WZ75 1007 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 OR5P2Q8WZ92 322 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 PPP3R2Q96LZ3 170 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 HDHD5Q9BXW7 423 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 HOXD1Q9GZZ0 328 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 GP6Q9HCN6 339 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
CKS1B-202ENST00000368436 HS3ST1O14792 307 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 SMAD7O15105 426 aaKnown RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 OIP5O43482 229 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 GCM2O75603 506 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 SOX30O94993 753 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 CNOT4O95628 575 aaKnown RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 LAMP1P11279 417 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 MAPK1P28482 360 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 SFTPDP35247 375 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 CCT3P49368 545 aaKnown RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 P2RX1P51575 399 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 ZNF844Q08AG5 666 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 RNPS1Q15287 305 aaKnown RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 XKR7Q5GH72 579 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 ADAM5Q6NVV9 412 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 CBLN3Q6UW01 205 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 NATD1Q8N6N6 113 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 BANPQ8N9N5 519 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 ZNF527Q8NB42 609 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 STEAP2Q8NFT2 490 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 ABHD3Q8WU67 409 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 CPNE4Q96A23 557 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 COQ8BQ96D53 544 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 APOPT1Q96IL0 206 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 ACTRT3Q9BYD9 372 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 SRXN1Q9BYN0 137 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 C12orf49Q9H741 205 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 CXorf36Q9H7Y0 433 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 EML4Q9HC35 981 aaKnown RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 TIGARQ9NQ88 270 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 GPATCH2Q9NW75 528 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 GIMAP2Q9UG22 337 aa14.27□□□□□ -0.13
CKS1B-202ENST00000368436 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-202ENST00000368436 NPIPB9F8W1W9 429 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms