RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PDIA2Q13087 525 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 SERTAD2Q14140 314 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 RCN2Q14257 317 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 MORF4L2Q15014 288 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 EFTUD2Q15029 972 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 TGFBIQ15582 683 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR4D1Q15615 310 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 PDK4Q16654 411 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 KRTAP21-3Q3LHN1 58 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ADPRMQ3LIE5 342 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 SLC22A10Q63ZE4 541 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 TMEM88Q6PEY1 159 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 OPN5Q6U736 354 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 DGAT2L6Q6ZPD8 337 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 GPSM1Q86YR5 675 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 TGIF2LYQ8IUE0 185 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 KLHL7Q8IXQ5 586 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 RNF175Q8N4F7 328 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ACOT4Q8N9L9 421 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 RELL2Q8NC24 303 aaPredicted RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 MYRIPQ8NFW9 859 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR52N4Q8NGI2 321 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR5L2Q8NGL0 311 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR8K3Q8NH51 312 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZNF721Q8TF20 911 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ANKRD7Q92527 254 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ANKRD9Q96BM1 317 aaPredicted RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 PPWD1Q96BP3 646 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 VPS39Q96JC1 886 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 JSRP1Q96MG2 331 aaPredicted RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 GPR78Q96P69 363 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 GAL3ST4Q96RP7 486 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 PRPF18Q99633 342 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 FOXC2Q99958 501 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 ELAC2Q9BQ52 826 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 SORBS1Q9BX66 1292 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 TRIM31Q9BZY9 425 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 NT5DC2Q9H857 520 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 DNAJC11Q9NVH1 559 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 CD274Q9NZQ7 290 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 MSRB1Q9NZV6 116 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 COPS7AQ9UBW8 275 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 SETD2Q9BYW2 2564 aaPredicted RBP4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 AKAP6Q13023 2319 aa4.72□□□□□ -1.65
RNU4-4P-201ENST00000364588 NF1P21359 2839 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 C15orf38-AP3S2A0A0A6YYH1 394 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 WASHC1A8K0Z3 465 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 UGDHO60701 494 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 HCN1O60741 890 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 STK16O75716 305 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 CCDC166P0CW27 439 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 COX7A2P14406 83 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 GABRA1P14867 456 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 EPORP19235 508 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 HIST1H1TP22492 207 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 DNASE1P24855 282 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 HPDP32754 393 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SSR2P43308 183 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 ARL4CP56559 192 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLC37A1P57057 533 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 HERVK_113P63132 956 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 ERVK-8P63133 956 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 DR1Q01658 176 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 IRF8Q02556 426 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 CHIT1Q13231 466 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLAMF1Q13291 335 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 DDX39BQ13838 428 aaKnown RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 HYAL4Q2M3T9 481 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 AP5B1Q2VPB7 878 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF791Q3KP31 576 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLC25A35Q3KQZ1 300 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 PIGGQ5H8A4 983 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 RIPPLY2Q5TAB7 128 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 C18orf63Q68DL7 685 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SULT1C3Q6IMI6 304 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 TMEM64Q6YI46 380 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 Q71RC1 249 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 CDC20BQ86Y33 519 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 C9orf40Q8IXQ3 194 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 TCAIMQ8N3R3 496 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 LIX1Q8N485 282 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 NAXEQ8NCW5 288 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 CHDHQ8NE62 594 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 FBXO36Q8NEA4 188 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 TNIP2Q8NFZ5 429 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 OR10G3Q8NGC4 313 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 GOT1L1Q8NHS2 421 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLC22A8Q8TCC7 542 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF473Q8WTR7 871 aaKnown RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 LRRC39Q96DD0 335 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SPACA9Q96E40 222 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 RMND5BQ96G75 393 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 TMEM41AQ96HV5 264 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 DGAT2Q96PD7 388 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 KRT12Q99456 494 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 PIMREGQ9BSJ6 248 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 TBCDQ9BTW9 1192 aa4.71□□□□□ -1.66
RNU4-4P-201ENST00000364588 DOHHQ9BU89 302 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms