RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MOV10Q9HCE1 1003 aaKnown RBP12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 RHCGQ9UBD6 479 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 C19orf53Q9UNZ5 99 aaPredicted RBP12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 RPL36Q9Y3U8 105 aaKnown RBP12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 DSPPQ9NZW4 1301 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SCG5P05408 212 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CRISP3P54108 245 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 IGLV3-21P80748 117 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 TRMT12Q53H54 448 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SOWAHCQ53LP3 525 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CCDC157Q569K6 752 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SLX4IPQ5VYV7 408 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 PWWP2BQ6NUJ5 590 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 ATCAYQ86WG3 371 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 GALNT12Q8IXK2 581 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 VWA5B2Q8N398 1253 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 OR9Q1Q8NGQ5 310 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 PTCHD1Q96NR3 888 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC30A2Q9BRI3 323 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC25A19Q9HC21 320 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 ADAP2Q9NPF8 381 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MKKSQ9NPJ1 570 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MAT2BQ9NZL9 334 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 AKAP7Q9P0M2 348 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 LIPT1Q9Y234 373 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 M0R129 80 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 KCNK2O95069 426 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MFN2O95140 757 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 IFNA16P05015 189 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 H1F0P07305 194 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MAOAP21397 527 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 PSMA1P25786 263 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 FOXL2P58012 376 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MAP4K2Q12851 820 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 IL11RAQ14626 422 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 PUM1Q14671 1186 aaKnown RBP eCLIP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MINDY4Q4G0A6 757 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 GPAT3Q53EU6 434 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 TMEM201Q5SNT2 666 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MFSD12Q6NUT3 480 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CDC73Q6P1J9 531 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 ZCCHC12Q6PEW1 402 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CCBE1Q6UXH8 406 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 MED25Q71SY5 747 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 C16orf62Q7Z3J2 963 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CTRCQ99895 268 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 TAPBPLQ9BX59 468 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 LANCL2Q9NS86 450 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 NCDNQ9UBB6 729 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 SEC14L4Q9UDX3 406 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
SQSTM1-201ENST00000360718 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 EFCAB7A8K855 629 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 DYRK3O43781 588 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 OR10H3O60404 316 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 ENTPD6O75354 484 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 RECKO95980 971 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 CT62P0C5K7 136 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 TNNI3P19429 210 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 C1DQ13901 141 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 CSRP2Q16527 193 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 SYPL1Q16563 259 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 RNLSQ5VYX0 342 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 WDR53Q7Z5U6 358 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 OR8J1Q8NGP2 316 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC9A6Q92581 669 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 PMEPA1Q969W9 287 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 GIMAP5Q96F15 307 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF354BQ96LW1 612 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF578Q96N58 590 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 IL4I1Q96RQ9 567 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 CDC6Q99741 560 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC22A11Q9NSA0 550 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 QPCTLQ9NXS2 382 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 ZFHX2Q9C0A1 2572 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-201ENST00000360718 TRBV4-1A0A0J9YWV2 114 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 PRAMEF27A3QJZ7 478 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 H3BN98 237 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 FFAR1O14842 300 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 POLR1CO15160 346 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 CCL4P13236 92 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 RORCP51449 518 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 COPZ1P61923 177 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 MGAT2Q10469 447 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 SPHARQ15513 63 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 QSOX2Q6ZRP7 698 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 GDPD3Q7L5L3 318 aa12.18□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC34A3Q8N130 599 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms