RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 AHRP35869 848 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 KHKP50053 298 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CDK5Q00535 292 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF91Q05481 1191 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SPHARQ15513 63 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NDUFA9Q16795 377 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ENTPD8Q5MY95 495 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PRAMEF8Q5VWM4 474 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PRAMEF7Q5VXH5 474 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 GDPGP1Q6ZNW5 385 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OLIG3Q7RTU3 272 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 BCDIN3DQ7Z5W3 292 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ADCK2Q7Z695 626 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CLIP4Q8N3C7 705 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TCEANCQ8N8B7 351 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ACOT4Q8N9L9 421 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PROKR2Q8NFJ6 384 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR52E1Q8NGJ3 308 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR6T1Q8NGN1 323 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PRRC1Q96M27 445 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SDHCQ99643 169 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MACROD1Q9BQ69 325 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NUDT16L1Q9BRJ7 211 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MRI1Q9BV20 369 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SPATA5L1Q9BVQ7 753 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MND1Q9BWT6 205 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ROGDIQ9GZN7 287 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SYNPO2LQ9H987 977 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SFXN1Q9H9B4 322 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MRPS30Q9NP92 439 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 DLL4Q9NR61 685 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PLEKHM1Q9Y4G2 1056 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MN1Q10571 1320 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TRIOO75962 3097 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 DOCK9Q9BZ29 2069 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 A0A0G2JPF8 293 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 GLOD5A6NK44 160 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HNRNPCL2B2RXH8 293 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HNRNPCL3B7ZW38 293 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CASC3O15234 703 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 KCNJ13O60928 360 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HMGN2P05204 90 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SERPIND1P05546 499 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HNRNPCL4P0DMR1 293 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ATP5A1P25705 553 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PEBP1P30086 187 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NTSP30990 170 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 GAS1P54826 345 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ABATP80404 500 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 FBXO46Q6PJ61 603 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 GET4Q7L5D6 327 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HMGN2P46Q86SG4 172 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HDDC3Q8N4P3 179 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR2L5Q8NG80 312 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR2L3Q8NG85 312 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR4K5Q8NGD3 323 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR8K5Q8NH50 307 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 FAM131CQ96AQ9 280 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TSSK6Q9BXA6 273 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PINK1Q9BXM7 581 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PLA2G2FQ9BZM2 168 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OSGEPL1Q9H4B0 414 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SIAEQ9HAT2 523 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 C3orf14Q9HBI5 128 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HEYLQ9NQ87 328 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PHPT1Q9NRX4 125 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 IMP3Q9NV31 184 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NDUFB11Q9NX14 153 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TRPC4Q9UBN4 977 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CAMK2AQ9UQM7 478 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 KCNK6Q9Y257 313 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SLC9A8Q9Y2E8 581 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 NINQ8N4C6 2090 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ERI3O43414 337 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 KCNK2O95069 426 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PTTG1O95997 202 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TNNI3P19429 210 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 GTF2E2P29084 291 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 RPS19P39019 145 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SOX3P41225 446 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TSFMP43897 325 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PCYT1AP49585 367 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 DCAF7P61962 342 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 MLLT11Q13015 90 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 GNA13Q14344 377 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 DUSP6Q16828 381 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF750Q32MQ0 723 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SYT14P1Q58G82 188 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ACSM5Q6NUN0 579 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SLC48A1Q6P1K1 146 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 BHLHB9Q6PI77 547 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 MRGPREQ86SM8 312 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SLC34A3Q8N130 599 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 IQCF1Q8N6M8 205 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 FLCNQ8NFG4 579 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 C3orf49Q96BT1 292 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 MOAP1Q96BY2 351 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms