RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 C6orf183Q5T699 404 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 YOD1Q5VVQ6 348 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 FAM109AQ8N4B1 249 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 C7orf43Q8WVR3 580 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 A0A1W2PS29 197 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 F6UZH7 168 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 DENRO43583 198 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 BEST1O76090 585 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 KCNAB2Q13303 367 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 PPP1R3BQ86XI6 285 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 ASB17Q8WXJ9 295 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 L3HYPDHQ96EM0 354 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 BMPR1AP36894 532 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 SELENOWP63302 87 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 BLOC1S3Q6QNY0 202 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 OR4N2Q8NGD1 307 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ANKRD19PQ9H560 264 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 PCTPQ9UKL6 214 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 GOSR2O14653 212 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 WDPCPO95876 746 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 KDELR2P33947 212 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ACTBL2Q562R1 376 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 TMEM71Q6P5X7 295 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 SBSNQ6UWP8 590 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 GRAMD2AQ8IUY3 354 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 NRMQ8IXM6 262 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CPEB3Q8NE35 698 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 SCAMP4Q969E2 229 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CCNL2Q96S94 520 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 OR51E2Q9H255 320 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ENPP4Q9Y6X5 453 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ZNF701M0R085 212 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 MSTNO14793 375 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 NDUFB2O95178 105 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CSF2P04141 144 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 IL1RNP18510 177 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 AHRP35869 848 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 DUSP7Q16829 419 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 DDX1Q92499 740 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 ZNF286AQ9HBT8 521 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 B3GAT1Q9P2W7 334 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 LSM5Q9Y4Y9 91 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 F8W036 122 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CFHP08603 1231 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CKMT1AP12532 417 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 EMP2P54851 167 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 BLOC1S1P78537 153 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 C22orf42Q6IC83 251 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 TMPRSS7Q7RTY8 843 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CHDHQ8NE62 594 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 IGSF8Q969P0 613 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 CIDECQ96AQ7 238 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 NFKBIEO00221 500 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 VEGFCP49767 419 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 FAM46AQ96IP4 442 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 B3GALT1Q9Y5Z6 326 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 TNCP24821 2201 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 H3BML4 177 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 BOLA2-SMG1P6H3BVE0 249 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 PRPH2P23942 346 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 IL10RAQ13651 578 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 PLBD1Q6P4A8 553 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ZNF696Q9H7X3 374 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 ANKRD36CQ5JPF3 1778 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 C20orf202A1L168 122 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 MEN1O00255 615 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 RGS6P49758 472 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 AFF3P51826 1226 aaKnown RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 MICAQ29983 383 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 PNCKQ6P2M8 343 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 OR5W2Q8NH69 310 aa9.13□□□□□ -0.95
CUX1-203ENST00000360264 SMAP2Q8WU79 429 aaPredicted RBP9.13□□□□□ -0.95
CUX1-203ENST00000360264 TMEM212A6NML5 194 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 C4orf47A7E2U8 309 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 C17orf112F2Z3M2 114 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 KNG1P01042 644 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 NDUFAF5Q5TEU4 345 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ZBTB8BQ8NAP8 495 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 SDR39U1Q9NRG7 319 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 CACNG4Q9UBN1 327 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 GABARAPH6UMI1 98 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 GABARAPO95166 117 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SFTPDP35247 375 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 XCR1P46094 333 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ATP1B3P54709 279 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 LTB4RQ15722 352 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SFT2D3Q587I9 215 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 FIGNL1Q6PIW4 674 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 CREB3L2Q70SY1 520 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 BADQ92934 168 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ANKMY1Q9P2S6 941 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 CAMK2AQ9UQM7 478 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 NARSO43776 548 aaKnown RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 NFYAP23511 347 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 GABRR1P24046 479 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms