RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PDE7AQ13946 482 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 PLPPR5Q32ZL2 321 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ARL13AQ5H913 290 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 Q5PR19 223 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 TMEM201Q5SNT2 666 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CCNJQ5T5M9 372 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 BHLHB9Q6PI77 547 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 PLEKHM3Q6ZWE6 761 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 MTERF4Q7Z6M4 381 aaKnown RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 TRABD2AQ86V40 505 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CXorf67Q86X51 503 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 OR5P2Q8WZ92 322 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 OSTF1Q92882 214 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CDS1Q92903 461 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ARL8AQ96BM9 186 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 GIMAP5Q96F15 307 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 OTUB1Q96FW1 271 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 APOPT1Q96IL0 206 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 HDHD5Q9BXW7 423 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ACTRT3Q9BYD9 372 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 PIGUQ9H490 435 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 TMEM185BQ9H7F4 350 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 DUSP22Q9NRW4 184 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 FBXO34Q9NWN3 711 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 GIN1Q9NXP7 522 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ATP6V1HQ9UI12 483 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 LYPLA1O75608 230 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 TUBBP07437 444 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 CHRNGP07510 517 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 PRPS1L1P21108 318 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 SFTPDP35247 375 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 SERPINB5P36952 375 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 NR1H2P55055 460 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 LASP1Q14847 261 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 GUSBP1Q15486 140 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 BEX5Q5H9J7 111 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 CDC73Q6P1J9 531 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 Q71RC1 249 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 BANPQ8N9N5 519 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 FNDC5Q8NAU1 212 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 OR7A2PQ8NGA2 310 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 MOAP1Q96BY2 351 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 FAM120BQ96EK7 910 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 PERPQ96FX8 193 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 KLHL15Q96M94 604 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 SMR3AQ99954 134 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 C12orf49Q9H741 205 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 MKS1Q9NXB0 559 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 GPR52Q9Y2T5 361 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
CAPN3-204ENST00000356316 MTORP42345 2549 aa9.54□□□□□ -0.88
CAPN3-204ENST00000356316 A0A0J9YW62 118 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 SIAH2O43255 324 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 SPAG7O75391 227 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 PRKD3O94806 890 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 LAMP1P11279 417 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 PSMA4P25789 261 aaKnown RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ADH6P28332 368 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 P2RX1P51575 399 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 MAD2L1Q13257 205 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 CTU2Q2VPK5 515 aaKnown RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 UGT3A2Q3SY77 523 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 IL23RQ5VWK5 629 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 YTHDF3Q7Z739 585 aaKnown RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ZAR1Q86SH2 424 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 WFDC8Q8IUA0 241 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ZNF614Q8N883 585 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 LRRN4CLQ8ND94 238 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 STEAP2Q8NFT2 490 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 OR2W6PQ8NHA6 318 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 PPP1R14CQ8TAE6 165 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 TCP10LQ8TDR4 215 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ROBO4Q8WZ75 1007 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 CPNE4Q96A23 557 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 TUBGCP3Q96CW5 907 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 Q96MF0 132 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 TACO1Q9BSH4 297 aaKnown RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 MECRQ9BV79 373 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ROPN1BQ9BZX4 212 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ACTR6Q9GZN1 396 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 ROPN1Q9HAT0 212 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 NGBQ9NPG2 151 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 CARD8Q9Y2G2 431 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 GPC6Q9Y625 555 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-204ENST00000356316 HEATR5AQ86XA9 2040 aa9.53□□□□□ -0.88
CAPN3-204ENST00000356316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-204ENST00000356316 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms