RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OR1Q1Q15612 314 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 RPTNQ6XPR3 784 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 THSD4Q6ZMP0 1018 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 RANBP3LQ86VV4 465 aaPredicted RBP18.18■□□□□ 0.5
COL13A1-201ENST00000354547 GHDCQ8N2G8 530 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 ACBD7Q8N6N7 88 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 FRMD1Q8N878 549 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 ASCC1Q8N9N2 400 aaKnown RBP18.18■□□□□ 0.5
COL13A1-201ENST00000354547 KIR3DX1Q9H7L2 352 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 ISYNA1Q9NPH2 558 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 KCNE5Q9UJ90 142 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 NOX1Q9Y5S8 564 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 A0A1W2PPK0 400 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 E9PI62 339 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 K7EQS6 105 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 KLF4O43474 513 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 SHC1P29353 583 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 TFF2Q03403 129 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 SRSF5Q13243 272 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 FZD5Q13467 585 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM196Q5HYL7 178 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM52Q8NDY8 209 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 MYADMQ96S97 322 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 PRSS27Q9BQR3 290 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 RMI1Q9H9A7 625 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 KLHL1Q9NR64 748 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 A0A0G2JMP0 313 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 A0A0X1KG70 313 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 GTPBP1O00178 669 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 CPMP14384 443 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ELK1P19419 428 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 NOS3P29474 1203 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ACVR1BP36896 505 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 RPS5P46782 204 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 SUZ12Q15022 739 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 CEBPEQ15744 281 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 DCST2Q5T1A1 773 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF761Q86XN6 746 aaPredicted RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 OR4M2Q8NGB6 313 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM239Q8WW34 195 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 EXTL2Q9UBQ6 330 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 DAPP1Q9UN19 280 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 EXOGQ9Y2C4 368 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 DOCK8Q8NF50 2099 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 SMLR1H3BR10 107 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 MAGEB4O15481 346 aaPredicted RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 RNF13O43567 381 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 OR10A3P58181 314 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ARHGAP11BQ3KRB8 267 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ITPRIPL2Q3MIP1 535 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 RNASE12Q5GAN4 147 aaKnown RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 DNAJA4Q8WW22 397 aaPredicted RBP18.17■□□□□ 0.5
COL13A1-201ENST00000354547 HERVK_113Q902F9 699 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 SNX18Q96RF0 628 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 C1QTNF7Q9BXJ2 289 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 RBCK1Q9BYM8 510 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 ANKRD19PQ9H560 264 aa18.17■□□□□ 0.5
COL13A1-201ENST00000354547 TRAPPC13A5PLN9 417 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 PRR19A6NJB7 356 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 LYRM1O43325 122 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 FGF17O60258 216 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 EEF1A1P68104 462 aaKnown RBP18.16■□□□□ 0.5
COL13A1-201ENST00000354547 OR2L13Q8N349 312 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 GALNT6Q8NCL4 622 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 NR4A3Q92570 626 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 OR2A5Q96R48 311 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 HEBP2Q9Y5Z4 205 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 ALG5Q9Y673 324 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 GXYLT2A0PJZ3 443 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 FAM172BPA6NC97 362 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 J3QLW9 94 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 LINC01565O15544 149 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 IGHA1P01876 353 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 PRKAR1AP10644 381 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF19P17023 458 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 COL9A1P20849 921 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 GABRA3P34903 492 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 TSFMP43897 325 aaKnown RBP18.16■□□□□ 0.5
COL13A1-201ENST00000354547 SHC2P98077 582 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 CDK10Q15131 360 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 ZAR1Q86SH2 424 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 NOXA1Q86UR1 476 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 HS6ST2Q96MM7 605 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 SARGQ9BW04 601 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 BABAM2Q9NXR7 383 aa18.16■□□□□ 0.5
COL13A1-201ENST00000354547 UGT2B7P16662 529 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 SDHBP21912 280 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 KIR2DL1P43626 348 aaPredicted RBP18.15■□□□□ 0.5
COL13A1-201ENST00000354547 HCCSP53701 268 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 E2F1Q01094 437 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 NDUFA5Q16718 116 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 Q5BKY6 102 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 NIPAL3Q6P499 406 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 MZT2AQ6P582 158 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 FIGLAQ6QHK4 219 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 SLC37A3Q8NCC5 494 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 OR52N1Q8NH53 320 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 PTCHD1Q96NR3 888 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 NDEL1Q9GZM8 345 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms