RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GPLD1P80108 840 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 HLA-BQ31612 363 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 OR2A1Q8NGT9 310 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 ISOC1Q96CN7 298 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 MAELQ96JY0 434 aaKnown RBP12.79□□□□□ -0.36
SMC6-201ENST00000351948 EGLN3Q9H6Z9 239 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 EPOPA6NHQ4 379 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 FGF17O60258 216 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 EFR3AQ14156 821 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GXYLT1Q4G148 440 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 ULK3Q6PHR2 472 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 OR52D1Q9H346 318 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 SLC35A3Q9Y2D2 325 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 CAPZA1P52907 286 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 TUBA4AP68366 448 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SAMD12Q8N8I0 201 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 OR14A16Q8NHC5 309 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 ACOT11Q8WXI4 607 aaPredicted RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 BEX2Q9BXY8 128 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 C5orf67F2Z3F1 127 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 HCRTR1O43613 425 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 MAS1P04201 325 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CELA2BP08218 269 aaPredicted RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 ENTPD1P49961 510 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 STK11Q15831 433 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SMN1Q16637 294 aaKnown RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 TMEM176BQ3YBM2 270 aaPredicted RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 ZNF385BQ569K4 471 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 QSOX2Q6ZRP7 698 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SIRT6Q8N6T7 355 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 OR13C2Q8NGS9 318 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 WACQ9BTA9 647 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SH2B3Q9UQQ2 575 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SAGE2PA6NJ88 616 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CTNSO60931 367 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 PNMTP11086 282 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 POU3F2P20265 443 aaPredicted RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 NKAPLQ5M9Q1 402 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 TMPRSS12Q86WS5 348 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 TSLPQ969D9 159 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 TAMM41Q96BW9 452 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 BMFQ96LC9 184 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SAP130Q9H0E3 1048 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SLC17A4Q9Y2C5 497 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 H7C1C5 153 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 K7EQS6 105 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 ZNF264O43296 627 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CCNKO75909 580 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CCL11P51671 97 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 TAS2R43P59537 309 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 LCN6P62502 163 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 ZNF404Q494X3 552 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 OPN5Q6U736 354 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 CCDC80Q76M96 950 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 NPRL2Q8WTW4 380 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 PLAC1Q9HBJ0 212 aa12.78□□□□□ -0.36
SMC6-201ENST00000351948 MYEF2Q9P2K5 600 aaKnown RBP12.78□□□□□ -0.36
SMC6-201ENST00000351948 CAPZBP47756 277 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 SLC6A8P48029 635 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 POU3F1Q03052 451 aaPredicted RBP12.77□□□□□ -0.36
SMC6-201ENST00000351948 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 BICRALQ6AI39 1079 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 CNEP1R1Q8N9A8 125 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.36
SMC6-201ENST00000351948 GINS4Q9BRT9 223 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 SGPP1Q9BX95 441 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 FANCFQ9NPI8 374 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 HEMK1Q9Y5R4 338 aaPredicted RBP12.77□□□□□ -0.36
SMC6-201ENST00000351948 CNOT1A5YKK6 2376 aaKnown RBP12.77□□□□□ -0.36
SMC6-201ENST00000351948 A6NLC8 198 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 F5H5K5 113 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 TAF4O00268 1085 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 SLC35E2P0CK97 266 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 POU3F4P49335 361 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 HLCSP50747 726 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 AP3S2P59780 193 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 CDK5R2Q13319 367 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.36
SMC6-201ENST00000351948 PLEKHA6Q9Y2H5 1048 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 PCDHGA8Q9Y5G5 932 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.36
SMC6-201ENST00000351948 CBX5P45973 191 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
SMC6-201ENST00000351948 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
SMC6-201ENST00000351948 ZNF227Q86WZ6 799 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 RBM45Q8IUH3 476 aaKnown RBP12.77□□□□□ -0.37
SMC6-201ENST00000351948 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 TMIGD2Q96BF3 282 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 C2orf42Q9NWW7 574 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms