RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 VN1R2Q8NFZ6 395 aa16.61■□□□□ 0.25
APP-202ENST00000348990 OR52D1Q9H346 318 aa16.61■□□□□ 0.25
APP-202ENST00000348990 WDR26Q9H7D7 661 aa16.61■□□□□ 0.25
APP-202ENST00000348990 RPS6KB2Q9UBS0 482 aa16.61■□□□□ 0.25
APP-202ENST00000348990 LIPT1Q9Y234 373 aa16.61■□□□□ 0.25
APP-202ENST00000348990 SCN8AQ9UQD0 1980 aa16.61■□□□□ 0.25
APP-202ENST00000348990 hCG_1807616A0A1W2PRN6 198 aa16.61■□□□□ 0.25
APP-202ENST00000348990 HCCSP53701 268 aa16.61■□□□□ 0.25
APP-202ENST00000348990 SLC9A5Q14940 896 aa16.61■□□□□ 0.25
APP-202ENST00000348990 TP53I3Q53FA7 332 aa16.61■□□□□ 0.25
APP-202ENST00000348990 LY6G5CQ5SRR4 150 aa16.61■□□□□ 0.25
APP-202ENST00000348990 OR4C11Q6IEV9 310 aa16.61■□□□□ 0.25
APP-202ENST00000348990 Q6ZTK2 550 aa16.61■□□□□ 0.25
APP-202ENST00000348990 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
APP-202ENST00000348990 FAM129CQ86XR2 697 aa16.61■□□□□ 0.25
APP-202ENST00000348990 CPXM2Q8N436 756 aa16.61■□□□□ 0.25
APP-202ENST00000348990 ZNF614Q8N883 585 aa16.61■□□□□ 0.25
APP-202ENST00000348990 OR6M1Q8NGM8 313 aa16.61■□□□□ 0.25
APP-202ENST00000348990 KCTD12Q96CX2 325 aaKnown RBP16.61■□□□□ 0.25
APP-202ENST00000348990 SLC46A2Q9BY10 475 aa16.61■□□□□ 0.25
APP-202ENST00000348990 ZDHHC5Q9C0B5 715 aa16.61■□□□□ 0.25
APP-202ENST00000348990 PFDN2Q9UHV9 154 aa16.61■□□□□ 0.25
APP-202ENST00000348990 SPTBP11277 2137 aa16.61■□□□□ 0.25
APP-202ENST00000348990 FAM86C2PA6NEL3 165 aa16.61■□□□□ 0.25
APP-202ENST00000348990 FLRT2O43155 660 aa16.61■□□□□ 0.25
APP-202ENST00000348990 PEX14O75381 377 aa16.61■□□□□ 0.25
APP-202ENST00000348990 CLUP10909 449 aa16.61■□□□□ 0.25
APP-202ENST00000348990 IL32P24001 234 aa16.61■□□□□ 0.25
APP-202ENST00000348990 TCEA2Q15560 299 aa16.61■□□□□ 0.25
APP-202ENST00000348990 ZNF620Q6ZNG0 422 aa16.61■□□□□ 0.25
APP-202ENST00000348990 BTN2A1Q7KYR7 527 aa16.61■□□□□ 0.25
APP-202ENST00000348990 MEPCEQ7L2J0 689 aaKnown RBP16.61■□□□□ 0.25
APP-202ENST00000348990 FANK1Q8TC84 345 aa16.61■□□□□ 0.25
APP-202ENST00000348990 FGF11Q92914 225 aa16.61■□□□□ 0.25
APP-202ENST00000348990 GINS4Q9BRT9 223 aa16.61■□□□□ 0.25
APP-202ENST00000348990 ACSS1Q9NUB1 689 aaPredicted RBP16.61■□□□□ 0.25
APP-202ENST00000348990 CASC3O15234 703 aaKnown RBP16.6■□□□□ 0.25
APP-202ENST00000348990 ARPC5O15511 151 aa16.6■□□□□ 0.25
APP-202ENST00000348990 LCMT2O60294 686 aaKnown RBP16.6■□□□□ 0.25
APP-202ENST00000348990 UBL3O95164 117 aa16.6■□□□□ 0.25
APP-202ENST00000348990 PLATP00750 562 aa16.6■□□□□ 0.25
APP-202ENST00000348990 PRR5P85299 388 aa16.6■□□□□ 0.25
APP-202ENST00000348990 HES5Q5TA89 166 aa16.6■□□□□ 0.25
APP-202ENST00000348990 GDF7Q7Z4P5 450 aa16.6■□□□□ 0.25
APP-202ENST00000348990 GID4Q8IVV7 300 aa16.6■□□□□ 0.25
APP-202ENST00000348990 NUP43Q8NFH3 380 aa16.6■□□□□ 0.25
APP-202ENST00000348990 OR7D2Q96RA2 312 aa16.6■□□□□ 0.25
APP-202ENST00000348990 UBL7Q96S82 380 aaPredicted RBP16.6■□□□□ 0.25
APP-202ENST00000348990 A0A0C4DFX4 3053 aa16.6■□□□□ 0.25
APP-202ENST00000348990 FXYD6-FXYD2A0A087WZ82 144 aa16.6■□□□□ 0.25
APP-202ENST00000348990 GMDSO60547 372 aa16.6■□□□□ 0.25
APP-202ENST00000348990 TBX6O95947 436 aaPredicted RBP16.6■□□□□ 0.25
APP-202ENST00000348990 APOC3P02656 99 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SULT1A3P0DMM9 295 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SULT1A4P0DMN0 295 aa16.6■□□□□ 0.25
APP-202ENST00000348990 ATF1P18846 271 aa16.6■□□□□ 0.25
APP-202ENST00000348990 POU3F2P20265 443 aaPredicted RBP16.6■□□□□ 0.25
APP-202ENST00000348990 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SFRP5Q5T4F7 317 aa16.6■□□□□ 0.25
APP-202ENST00000348990 FAM198BQ6UWH4 519 aa16.6■□□□□ 0.25
APP-202ENST00000348990 LCTLQ6UWM7 567 aa16.6■□□□□ 0.25
APP-202ENST00000348990 LHFPL5Q8TAF8 219 aa16.6■□□□□ 0.25
APP-202ENST00000348990 CD180Q99467 661 aa16.6■□□□□ 0.25
APP-202ENST00000348990 FXYD6Q9H0Q3 95 aa16.6■□□□□ 0.25
APP-202ENST00000348990 IL20Q9NYY1 176 aa16.6■□□□□ 0.25
APP-202ENST00000348990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.6■□□□□ 0.25
APP-202ENST00000348990 SOD2P04179 222 aa16.6■□□□□ 0.25
APP-202ENST00000348990 GKN3PP0CG01 181 aa16.6■□□□□ 0.25
APP-202ENST00000348990 CTSAP10619 480 aa16.6■□□□□ 0.25
APP-202ENST00000348990 GBX2P52951 348 aaPredicted RBP16.6■□□□□ 0.25
APP-202ENST00000348990 CAMK1Q14012 370 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SLC22A10Q63ZE4 541 aa16.6■□□□□ 0.25
APP-202ENST00000348990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■□□□□ 10.3
APP-202ENST00000348990 FGD2Q7Z6J4 655 aa16.6■□□□□ 0.25
APP-202ENST00000348990 ADGRG3Q86Y34 549 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SLC44A3Q8N4M1 653 aa16.6■□□□□ 0.25
APP-202ENST00000348990 OR9A2Q8NGT5 310 aa16.6■□□□□ 0.25
APP-202ENST00000348990 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
APP-202ENST00000348990 CXorf58Q96LI9 332 aa16.6■□□□□ 0.25
APP-202ENST00000348990 KLHL31Q9H511 634 aa16.6■□□□□ 0.25
APP-202ENST00000348990 MARK1Q9P0L2 795 aa16.6■□□□□ 0.25
APP-202ENST00000348990 FKBP7Q9Y680 259 aa16.6■□□□□ 0.25
APP-202ENST00000348990 SCAMP1O15126 338 aa16.59■□□□□ 0.25
APP-202ENST00000348990 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
APP-202ENST00000348990 IGHA1P01876 353 aa16.59■□□□□ 0.25
APP-202ENST00000348990 PTHLHP12272 177 aa16.59■□□□□ 0.25
APP-202ENST00000348990 FPR3P25089 353 aa16.59■□□□□ 0.25
APP-202ENST00000348990 CLDN12P56749 244 aa16.59■□□□□ 0.25
APP-202ENST00000348990 ST8SIA6P61647 398 aa16.59■□□□□ 0.25
APP-202ENST00000348990 FUT5Q11128 374 aa16.59■□□□□ 0.25
APP-202ENST00000348990 C18orf63Q68DL7 685 aa16.59■□□□□ 0.25
APP-202ENST00000348990 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
APP-202ENST00000348990 GJD3Q8N144 294 aa16.59■□□□□ 0.25
APP-202ENST00000348990 DIO2Q92813 273 aa16.59■□□□□ 0.25
APP-202ENST00000348990 SGTBQ96EQ0 304 aa16.59■□□□□ 0.25
APP-202ENST00000348990 B3GNT4Q9C0J1 378 aa16.59■□□□□ 0.25
APP-202ENST00000348990 KRCC1Q9NPI7 259 aaPredicted RBP16.59■□□□□ 0.25
APP-202ENST00000348990 TM7SF3Q9NS93 570 aa16.59■□□□□ 0.25
APP-202ENST00000348990 EXOGQ9Y2C4 368 aaKnown RBP16.59■□□□□ 0.25
APP-202ENST00000348990 CDHR4A6H8M9 788 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms