RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HSPB3Q12988 150 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF658BQ4V348 819 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-202ENST00000348987 AADACL4Q5VUY2 407 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 OR11G2Q8NGC1 345 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 OR10A4Q9H209 315 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 WDR26Q9H7D7 661 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF304Q9HCX3 659 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCARF1-202ENST00000348987 PIPOXQ9P0Z9 390 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 C5AR2Q9P296 337 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 PLAGL1Q9UM63 463 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 PCYT1BQ9Y5K3 369 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-202ENST00000348987 A0A087WUU8 490 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 PRAMEF27A3QJZ7 478 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 AIPO00170 330 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 KPNA3O00505 521 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 MID1O15344 667 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 GMDSO60547 372 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 KDM4BO94953 1096 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 SLC2A10O95528 541 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 IGHA1P01876 353 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 GSTM3P21266 225 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 TRIM23P36406 574 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 MANFP55145 182 aaKnown RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 E2F1Q01094 437 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF805Q5CZA5 627 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 PLPP4Q5VZY2 271 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 MRGPREQ86SM8 312 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 LRRC56Q8IYG6 542 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 TBC1D19Q8N5T2 526 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 OR4D9Q8NGE8 314 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 OR51G2Q8NGK0 314 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 SPATA5L1Q9BVQ7 753 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 AUNIPQ9H7T9 357 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 PLXNA2O75051 1894 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 A0A0G2JK05 382 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 MCRIP1C9JLW8 97 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 LINC01387J3KSC0 135 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 UBL3O95164 117 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 GALP22466 123 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 RNF144AP50876 292 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 RIPPLY1Q0D2K3 151 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 HLXQ14774 488 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 DPPA4Q7L190 304 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 CMIPQ8IY22 773 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 IZUMO1Q8IYV9 350 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 SEC22CQ9BRL7 303 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 KCNK12Q9HB15 430 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 MARK1Q9P0L2 795 aa17.38■□□□□ 0.37
SCARF1-202ENST00000348987 EXOGQ9Y2C4 368 aaKnown RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 KLF2Q9Y5W3 355 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-202ENST00000348987 CXorf51AA0A1B0GTR3 108 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ABHD14A-ACY1A0A1B0GW23 586 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 FAM74A7A6NL05 159 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 RTCAO00442 366 aaKnown RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SOCS6O14544 535 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SPINT1O43278 529 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 C1GALT1C1LP0DN25 315 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 GNSP15586 552 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 KLF9Q13886 244 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 FAM74A3Q4VXF1 159 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ARL9Q6T311 187 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SZRD1Q7Z422 152 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 KLHDC8AQ8IYD2 350 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF454Q8N9F8 522 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 OR5D16Q8NGK9 328 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ING5Q8WYH8 240 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 FAM46AQ96IP4 442 aaKnown RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 BABAM2Q9NXR7 383 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 FAM183AA6NL82 134 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 LILRB5O75023 590 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 EPPINO95925 133 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SNRPBP14678 240 aaKnown RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ARHGDIBP52566 201 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 FLI1Q01543 452 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 HTR4Q13639 388 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 TMEM255AQ5JRV8 349 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SLC22A10Q63ZE4 541 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 HIST2H2AA3Q6FI13 130 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 TRMT11Q7Z4G4 463 aaKnown RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 CEACAM19Q7Z692 300 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF547Q8IVP9 402 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 OR4Q3Q8NH05 313 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SCARB1Q8WTV0 552 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 XAGE5Q8WWM1 108 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 GIMAP5Q96F15 307 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 SLC35C2Q9NQQ7 365 aa17.37■□□□□ 0.37
SCARF1-202ENST00000348987 NPDC1Q9NQX5 325 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 CXXC1Q9P0U4 656 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-202ENST00000348987 NOTCH4Q99466 2003 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 LRRN3E7EW58 273 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SELENOFO60613 162 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SHC2P98077 582 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 OR5M10Q6IEU7 315 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SLITRK4Q8IW52 837 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 HMGB4Q8WW32 186 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 ZFPM2Q8WW38 1151 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 C12orf57Q99622 126 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms