RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HES5Q5TA89 166 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 RNF165Q6ZSG1 346 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 LRRC56Q8IYG6 542 aaPredicted RBP13.82□□□□□ -0.2
NUP50-201ENST00000347635 ZNF740Q8NDX6 193 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 THAP6Q8TBB0 222 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 HAVCR1Q96D42 359 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 POLE3Q9NRF9 147 aa13.82□□□□□ -0.2
NUP50-201ENST00000347635 LATO43561 262 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 ARSBP15848 533 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 MLF2Q15773 248 aaPredicted RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 KLHL26Q53HC5 615 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 IL20RBQ6UXL0 311 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 ZNF619Q8N2I2 560 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 TM4SF18Q96CE8 201 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 MACROD1Q9BQ69 325 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 G6PC3Q9BUM1 346 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 C17orf113A0A1B0GUU1 675 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 SMAD9O15198 467 aaKnown RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 HBQ1P09105 142 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 ENDOUP21128 410 aaKnown RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 E2F1Q01094 437 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 METTL11BQ5VVY1 283 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 JAGN1Q8N5M9 183 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PHOSPHO1Q8TCT1 267 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 CDS1Q92903 461 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 C4orf36Q96KX1 117 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 COQ10AQ96MF6 247 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 ARL6Q9H0F7 186 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 NIPAL2Q9H841 368 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PRODH2Q9UF12 536 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 S100A6P06703 90 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 GIFP27352 417 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 SMAD4Q13485 552 aaKnown RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 SLC35F2Q8IXU6 374 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 CYB561A3Q8NBI2 242 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 SLC35B4Q969S0 331 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 OPALINQ96PE5 141 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 TEX10Q9NXF1 929 aaPredicted RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 ZNF443Q9Y2A4 671 aaPredicted RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 M0R082 166 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PRAF2O60831 178 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 B4GALT2O60909 372 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 TFP02787 698 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 CD3GP09693 182 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 GLULP15104 373 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 HHEXQ03014 270 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 ALG10BQ5I7T1 473 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 FAM205BPQ63HN1 556 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 TPRA1Q86W33 373 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 PRSS58Q8IYP2 241 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 OR2M2Q96R28 347 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 FARSAQ9Y285 508 aaKnown RBP13.81□□□□□ -0.2
NUP50-201ENST00000347635 MED16Q9Y2X0 877 aa13.81□□□□□ -0.2
NUP50-201ENST00000347635 TRDV1A0A1B0GX56 115 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 A8MVJ9 347 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 CSTAP01040 98 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 PDE7AQ13946 482 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 FAM69AQ5T7M9 428 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 HBMQ6B0K9 141 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 KIAA1211LQ6NV74 962 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 Q6ZSR6 202 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 NUP54Q7Z3B4 507 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 TOE1Q96GM8 510 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 C19orf43Q9BQ61 176 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 FZD3Q9NPG1 666 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 AK6Q9Y3D8 172 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 HTRA4P83105 476 aaPredicted RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 KIAA0895LQ68EN5 471 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 PRSS16Q9NQE7 514 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 SIRT5Q9NXA8 310 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 ARRDC5A6NEK1 342 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 NAP1L6A6NFF2 107 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 DISC1C4P0D8 188 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 FMO6PO60774 539 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 HIST1H1TP22492 207 aaPredicted RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 HTR3AP46098 478 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 RACK1P63244 317 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 KIR2DS3Q14952 304 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 POU4F3Q15319 338 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 MCEMP1Q8IX19 187 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 OR5K2Q8NHB8 316 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 TBL1XR1Q9BZK7 514 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 PLEKHA1Q9HB21 404 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 WISP3O95389 354 aaPredicted RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 MT-ND4P03905 459 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 JMJD7P0C870 316 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 ETV5P41161 510 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms