RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DUSP22Q9NRW4 184 aa19.86■□□□□ 0.77
CCDC38-201ENST00000344280 H2AFY2Q9P0M6 372 aaPredicted RBP19.86■□□□□ 0.77
CCDC38-201ENST00000344280 TCRBV21S2A2A0A5A6 115 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 TMCC2O75069 709 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 RFPL3O75679 317 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 HTR3AP46098 478 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 VSX2P58304 361 aaPredicted RBP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 ILF3Q12906 894 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 FCRLBQ6BAA4 426 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 MARCH9Q86YJ5 346 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CA13Q8N1Q1 262 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CDRT4Q8N9R6 151 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 TOR1AIP2Q8NFQ8 470 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CHAC2Q8WUX2 184 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 SIRT4Q9Y6E7 314 aaPredicted RBP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 AKAP8O43823 692 aaKnown RBP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 GALR3O60755 368 aaPredicted RBP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 ADAM11O75078 769 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CCNKO75909 580 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 HMGN1P05114 100 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CSTF1Q05048 431 aaKnown RBP19.85■□□□□ 0.77
CCDC38-201ENST00000344280 DEFB110Q30KQ9 67 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 XKRXQ6PP77 449 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 UBE2J2Q8N2K1 259 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 TMEM99Q8N816 258 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 GALNT6Q8NCL4 622 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 ATP6V1C2Q8NEY4 427 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 OR13C2Q8NGS9 318 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 CD180Q99467 661 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 RBCK1Q9BYM8 510 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 MARCH7Q9H992 704 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 SLC28A3Q9HAS3 691 aa19.85■□□□□ 0.77
CCDC38-201ENST00000344280 LRP4O75096 1905 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 A0A087WV62 115 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 C12orf71A8MTZ7 269 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 C2orf74A8MZ97 194 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 TFECO14948 347 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 POLR1CO15160 346 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 MAP3K8P41279 467 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 COPZ1P61923 177 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 ADAM15Q13444 863 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 NIPAL3Q6P499 406 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 ZNF517Q6ZMY9 492 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 TMEM91Q6ZNR0 172 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 RNF44Q7L0R7 432 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 CSNK1A1LQ8N752 337 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 NEIL3Q8TAT5 605 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 GRHL3Q8TE85 626 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 SLC37A2Q8TED4 501 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 ANKRD9Q96BM1 317 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 HS6ST2Q96MM7 605 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 FAM60AQ9NP50 221 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 MEPEQ9NQ76 525 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 MALT1Q9UDY8 824 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 SATB2Q9UPW6 733 aa19.84■□□□□ 0.77
CCDC38-201ENST00000344280 TDRD6O60522 2096 aaKnown RBP19.84■□□□□ 0.77
CCDC38-201ENST00000344280 HPGDSO60760 199 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 GABRG2P18507 467 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 TMEM44Q2T9K0 475 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 ABI3BPQ7Z7G0 1075 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 OR52N1Q8NH53 320 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 C11orf54Q9H0W9 315 aaPredicted RBP19.83■□□□□ 0.77
CCDC38-201ENST00000344280 TMEM165Q9HC07 324 aa19.83■□□□□ 0.77
CCDC38-201ENST00000344280 TRAV27A0A087WT01 109 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 HYAL3O43820 417 aaPredicted RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 BRINP1O60477 761 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 RDH16O75452 317 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 APEX1P27695 318 aaKnown RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 AKT2P31751 481 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 UBE2IP63279 158 aaKnown RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 SCN1BQ07699 218 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 PYDC2Q56P42 97 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 SMAP2Q8WU79 429 aaPredicted RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 HMGB4Q8WW32 186 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 PTP4A1Q93096 173 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 KISS1RQ969F8 398 aaPredicted RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 CTHRC1Q96CG8 243 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 SENP5Q96HI0 755 aaPredicted RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 STACQ99469 402 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 ATF6BQ99941 703 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 KRCC1Q9NPI7 259 aaPredicted RBP19.83■□□□□ 0.76
CCDC38-201ENST00000344280 PRDM9Q9NQV7 894 aa19.83■□□□□ 0.76
CCDC38-201ENST00000344280 REM1O75628 298 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 CBX7O95931 251 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 TYRP1P17643 537 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 ACSM1Q08AH1 577 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 KLHL12Q53G59 568 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 PDZK1Q5T2W1 519 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 ZNF614Q8N883 585 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 OR4N2Q8NGD1 307 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 OR6F1Q8NGZ6 308 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 GPBAR1Q8TDU6 330 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 CNOT9Q92600 299 aaKnown RBP19.82■□□□□ 0.76
CCDC38-201ENST00000344280 BPIFA2Q96DR5 249 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 NDRG2Q9UN36 371 aaKnown RBP19.82■□□□□ 0.76
CCDC38-201ENST00000344280 A0A0J9YY10 115 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 HRO43593 1189 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 HLA-DPB1P04440 258 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 CLUP10909 449 aa19.82■□□□□ 0.76
CCDC38-201ENST00000344280 NOS3P29474 1203 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms