RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 KLHDC8BQ8IXV7 354 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SGPP1Q9BX95 441 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 THAP10Q9P2Z0 257 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 TBX21Q9UL17 535 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 LAMB2P55268 1798 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 A0A087WUU8 490 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PSMB10P40306 273 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 FRKP42685 505 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 ERVK-25P63136 954 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 E2F1Q01094 437 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PDE7AQ13946 482 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 METRNLQ641Q3 311 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ANKRD54Q6NXT1 300 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ANKRD33Q7Z3H0 272 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ZER1Q7Z7L7 766 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMEM151BQ8IW70 566 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 INO80EQ8NBZ0 244 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 OR6C4Q8NGE1 309 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ELP4Q96EB1 424 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 OR10A4Q9H209 315 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 METTL7AQ9H8H3 244 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 NEU3Q9UQ49 428 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PCDHGB2Q9Y5G2 931 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TPRP12270 2363 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 KANTRA0A1W2PQU2 76 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CENPBD1B2RD01 187 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 GABRPO00591 440 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CYB5AP00167 134 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CASP3P42574 277 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 DHPSP49366 369 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 GDI2P50395 445 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 NSDHLQ15738 373 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMEM52BQ4KMG9 183 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SLC48A1Q6P1K1 146 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ULK3Q6PHR2 472 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMEM17Q86X19 198 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CCDC28AQ8IWP9 274 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PHC2Q8IXK0 858 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMEM156Q8N614 296 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PNLDC1Q8NA58 520 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ZNF566Q969W8 418 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ARL6Q9H0F7 186 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CREBL2O60519 120 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 CCR2P41597 374 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SNRPGP62308 76 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZNF77Q15935 545 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 FTMTQ8N4E7 242 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MFSD9Q8NBP5 474 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 OR13C2Q8NGS9 318 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 C4orf36Q96KX1 117 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ORAI3Q9BRQ5 295 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 BTBD2Q9BX70 525 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZNF717Q9BY31 904 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 ERVK-19Q9WJR5 959 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZNF443Q9Y2A4 671 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 PLEKHA6Q9Y2H5 1048 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TRAV18A0A075B6X5 111 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TVP23AA6NH52 213 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TRIM64CA6NLI5 447 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CDC40O60508 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZNF432O94892 652 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 FXYD6P3P58550 94 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TCTE1Q5JU00 501 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 LACC1Q8IV20 430 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ELMOD2Q8IZ81 293 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 OR52R1Q8NGF1 315 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ALG14Q96F25 216 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 GABARAPL3Q9BY60 117 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PIGUQ9H490 435 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 FGF22Q9HCT0 170 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 FBXO8Q9NRD0 319 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 KLHL9Q9P2J3 617 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TTC3P53804 2025 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 KIR2DS5A0A0G2JLQ3 304 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 A0A0G2JNG1 304 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 A0A0J9YY10 115 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 KIR2DS3K7RE56 304 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 GPX5O75715 221 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ITGA3P26006 1051 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 GABRA5P31644 462 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 BCL6P41182 706 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MRPL19P49406 292 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 KIR2DS5Q14953 304 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SYT14P1Q58G82 188 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ALG10Q5BKT4 473 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MAMDC2Q7Z304 686 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 GPAT4Q86UL3 456 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 NLRP8Q86W28 1048 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MCATQ8IVS2 390 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 OR9A4Q8NGU2 314 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PITX2Q99697 317 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CDCA4Q9BXL8 241 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 UBQLN3Q9H347 655 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms