RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 GPR37L1O60883 481 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SDC3O75056 442 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 F13BP05160 661 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 HNRNPKP61978 463 aaKnown RBP eCLIP8.18□□□□□ -1.1
RTN3-202ENST00000339997 CLDN10P78369 228 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ILKQ13418 452 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ERV3-1Q14264 604 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 EXOSC7Q15024 291 aaKnown RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 C14orf28Q4W4Y0 310 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 COQ5Q5HYK3 327 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 OR4C11Q6IEV9 310 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 DNM1P34Q6PK57 102 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 GSG1LQ6UXU4 331 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 GPR155Q7Z3F1 870 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ASPGQ86U10 573 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 IFNL1Q8IU54 200 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 GOLM1Q8NBJ4 401 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 OR7G1Q8NGA0 311 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 OR5AK2Q8NH90 309 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 NUP205Q92621 2012 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 DVL3Q92997 716 aaPredicted RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 BORCS8Q96FH0 119 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 TGM7Q96PF1 710 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SCGB3A2Q96PL1 93 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ZIC5Q96T25 663 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 MAF1Q9H063 256 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 TNFRSF12AQ9NP84 129 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 VDAC3Q9Y277 283 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 HSPE1-MOB4S4R3N1 261 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 BORCS7-ASMTA0A0B4J1R7 106 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ANKRD34BA5PLL1 514 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 COQ9O75208 318 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 GNB3P16520 340 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 EPHA2P29317 976 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ARRB2P32121 409 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 FGL1Q08830 312 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 PAQR6Q6TCH4 344 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 DPY19L4Q7Z388 723 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 RASGRP3Q8IV61 690 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 LKAAEAR1Q8TD35 194 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SLC12A9Q9BXP2 914 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 CWH43Q9H720 699 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ARAP2Q8WZ64 1704 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 TTLL8A6PVC2 850 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ATP6V1G2-DDX39BF2Z307 99 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 IFNA2P01563 188 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ERCC1P07992 297 aaPredicted RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 TMEM225BP0DP42 221 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ADH6P28332 368 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 PPT1P50897 306 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ERVFC1P60507 584 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 KEAP1Q14145 624 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 INAVAQ3KP66 663 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 COX20Q5RI15 118 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 OTPQ5XKR4 325 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SLC22A10Q63ZE4 541 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 AWAT2Q6E213 333 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SLC35D2Q76EJ3 337 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ERN2Q76MJ5 926 aaKnown RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 ZNF546Q86UE3 836 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 ZNF689Q96CS4 500 aaPredicted RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 OR51B6Q9H340 312 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 SPHK2Q9NRA0 654 aa8.18□□□□□ -1.1
RTN3-202ENST00000339997 UBE2J1Q9Y385 318 aaPredicted RBP8.18□□□□□ -1.1
RTN3-202ENST00000339997 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 F5H5K5 113 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 ZNF701M0R085 212 aaPredicted RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 SOCS5O75159 536 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 RHOP08100 348 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 PVRP15151 417 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 ATP5A1P25705 553 aaKnown RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 BDKRB2P30411 391 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 SFTPDP35247 375 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 ELOAQ14241 798 aaKnown RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 SLC9A3R2Q15599 337 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 GPR149Q86SP6 731 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 GLCCI1Q86VQ1 547 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 DNAJC22Q8N4W6 341 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 ACBD4Q8NC06 268 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 C2orf15Q8WU43 125 aaKnown RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 MUL1Q969V5 352 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 METTL2AQ96IZ6 378 aaKnown RBP8.17□□□□□ -1.1
RTN3-202ENST00000339997 HCFC1R1Q9NWW0 138 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 PCDHA9Q9Y5H5 950 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 RPS10-NUDT3A0A1W2PQS6 291 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 OIP5O43482 229 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 IL33O95760 270 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 PCSK2P16519 638 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 OMGP23515 440 aa8.17□□□□□ -1.1
RTN3-202ENST00000339997 RPS19P39019 145 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms