RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-202ENST00000338995 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 SLC16A11Q8NCK7 471 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 JADE3Q92613 823 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 EGLN2Q96KS0 407 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 CCT7Q99832 543 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 BTBD2Q9BX70 525 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-202ENST00000338995 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 TMED5Q9Y3A6 229 aa12.67□□□□□ -0.38
COMMD4-202ENST00000338995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
COMMD4-202ENST00000338995 DNHD1Q96M86 4753 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 OVOL3O00110 214 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 ZNF195O14628 629 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 NEFHP12036 1026 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 GCAP28676 217 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 RPL3P39023 403 aaKnown RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 ITGADQ13349 1161 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 DUSP5Q16690 384 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 FCRLAQ7L513 359 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 TUSC5Q8IXB3 177 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 MTERF3Q96E29 417 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 STACQ99469 402 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 GIN1Q9NXP7 522 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 KLHL13Q9P2N7 655 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 LIPT1Q9Y234 373 aa12.66□□□□□ -0.38
COMMD4-202ENST00000338995 GPC6Q9Y625 555 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 RAI1Q7Z5J4 1906 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-202ENST00000338995 NPIPB8E9PQR5 432 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 G3V2L1 256 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 RIPK2O43353 540 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ADAP00813 363 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 KRT16P08779 473 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ACP2P11117 423 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 CPA3P15088 417 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ECHS1P30084 290 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 SLC7A1P30825 629 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 P2RX1P51575 399 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 TAB1Q15750 504 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ANKRD26P1Q6NSI1 321 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 TFAP2EQ6VUC0 442 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 GABRG1Q8N1C3 465 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 RHNO1Q9BSD3 238 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 YAE1D1Q9NRH1 226 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 DUSP22Q9NRW4 184 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 MID2Q9UJV3 735 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-202ENST00000338995 ACTL7BQ9Y614 415 aa12.65□□□□□ -0.38
COMMD4-202ENST00000338995 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 RNF212BA8MTL3 300 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 AZIN1O14977 448 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 GCM2O75603 506 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-202ENST00000338995 SOD3P08294 240 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 DANCRP0C864 163 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 NID1P14543 1247 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 MAPK1P28482 360 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-202ENST00000338995 RAC3P60763 192 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 MLC1Q15049 377 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-202ENST00000338995 BHLHA15Q7RTS1 189 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-202ENST00000338995 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
COMMD4-202ENST00000338995 P2RY8Q86VZ1 359 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 TDRPQ86YL5 185 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 FBXO27Q8NI29 283 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 C16orf58Q96GQ5 468 aa12.64□□□□□ -0.39
COMMD4-202ENST00000338995 RADILQ96JH8 1075 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms