RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MAGEB1P43366 347 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 F2RL1P55085 397 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 ACTBP60709 375 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 ACTG1P63261 375 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MGAT3Q09327 533 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 PRAMEF20Q5VT98 475 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 PRICKLE2Q7Z3G6 844 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 BMFQ96LC9 184 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 BTBD2Q9BX70 525 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MMP27Q9H306 513 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 PREBQ9HCU5 417 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 OR6C2Q9NZP2 312 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 NSG1A0A0A6YYJ2 146 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 A0A1W2PQ09 198 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 F5H5P2 479 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 NPPAP01160 153 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 LGALS4P56470 323 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TDGQ13569 410 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TLDC1Q6P9B6 456 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TMEM139Q8IV31 216 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 SLC35B2Q8TB61 432 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 APIPQ96GX9 242 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MARCH4Q9P2E8 410 aaPredicted RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TRAV27A0A087WT01 109 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TSPAN11A1L157 253 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 CDK1P06493 297 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 SNHG28P0DPA3 235 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 BPIP17213 487 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MRPS34P82930 218 aaKnown RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 GK2Q14410 553 aaPredicted RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MPPED2Q15777 294 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 CTC1Q2NKJ3 1217 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 FAM198BQ6UWH4 519 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 FEVQ99581 238 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 FAM173AQ9BQD7 235 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 LINC00597Q9H2U6 94 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 GSRP00390 522 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 SNRNP70P08621 437 aaKnown RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 PLA2G7Q13093 441 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 CYP1B1Q16678 543 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 GPRIN1Q7Z2K8 1008 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 RBMXL1Q96E39 390 aaKnown RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TOE1Q96GM8 510 aaKnown RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 ZFYVE21Q9BQ24 234 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 C12orf49Q9H741 205 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 MTHFD2LQ9H903 347 aaPredicted RBP11.1□□□□□ -0.63
SHANK2-201ENST00000338508 ANKRD10Q9NXR5 420 aa11.1□□□□□ -0.63
SHANK2-201ENST00000338508 TEX51A0A1B0GUA7 166 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 TXNL1O43396 289 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 CNIH1O95406 144 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 IQCF3P0C7M6 154 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 BMXP51813 675 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 FADDQ13158 208 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 TCTE1Q5JU00 501 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ATG9BQ674R7 924 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 DPY19L2P1Q6NXN4 242 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 NIPAL3Q6P499 406 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 SULF2Q8IWU5 870 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 RDH10Q8IZV5 341 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF75AQ96N20 296 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 MMP28Q9H239 520 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 STC2O76061 302 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 AGFG1P52594 562 aaKnown RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 PIN1Q13526 163 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 FGFBP1Q14512 234 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF181Q2M3W8 571 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 CDS1Q92903 461 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 SLC38A1Q9H2H9 487 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ATG4BQ9Y4P1 393 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 CHD4Q14839 1912 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 OR10J4P0C629 311 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 FUT1P19526 365 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 GNB2P62879 340 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 FUT2Q10981 343 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 SF3B4Q15427 424 aaKnown RBP eCLIP11.09□□□□□ -0.631e-19■■■■■ 49.9
SHANK2-201ENST00000338508 HIST2H3PS2Q5TEC6 136 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF585AQ6P3V2 769 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 COX15Q7KZN9 410 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 KIAA0907Q7Z7F0 614 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 OR52R1Q8NGF1 315 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 OR5D14Q8NGL3 314 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF419Q96HQ0 510 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 UNKLQ9H9P5 680 aaKnown RBP11.09□□□□□ -0.63
SHANK2-201ENST00000338508 KCNJ16Q9NPI9 418 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ZDHHC7Q9NXF8 308 aa11.09□□□□□ -0.63
SHANK2-201ENST00000338508 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms