RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NGFRP08138 427 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 HPGDP15428 266 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 HOXC12P31275 282 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 SERPINB4P48594 390 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 RAC1P63000 192 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 PPP2R2AP63151 447 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 HBA1P69905 142 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 PHC1P78364 1004 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 FOXF1Q12946 379 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 TSC22D1Q15714 1073 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 PDCD2Q16342 344 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 SPDYE7PQ495Y7 208 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 KLHL26Q53HC5 615 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 HBMQ6B0K9 141 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 FAM214BQ7L5A3 538 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 C6orf120Q7Z4R8 191 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 CXorf67Q86X51 503 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 LILRA2Q8N149 483 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF781Q8N8C0 355 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 OR2V1Q8NHB1 315 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 FBXO27Q8NI29 283 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 ALPK1Q96QP1 1244 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 OR7D2Q96RA2 312 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 SLC39A3Q9BRY0 314 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 PARD6BQ9BYG5 372 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 SRXN1Q9BYN0 137 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 C12orf49Q9H741 205 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 AKTIPQ9H8T0 292 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.49
NUDCD3-201ENST00000338427 A0A087WZY1 265 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CENPVL1A0A0U1RR11 272 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 C9JVG2 144 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF195O14628 629 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ADAMDEC1O15204 470 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 FCMRO60667 390 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 PLAUP00749 431 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CD8BP10966 210 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CRYGSP22914 178 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 MAPK1P28482 360 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF41P51814 821 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CARD18P57730 90 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 NKX6-1P78426 367 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 EMX2Q04743 252 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CHI3L2Q15782 390 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 LSM12Q3MHD2 195 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 TMEM176BQ3YBM2 270 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 DCST2Q5T1A1 773 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 NUFIP2Q7Z417 695 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 HMGN2P46Q86SG4 172 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF614Q8N883 585 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 PSMA8Q8TAA3 256 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 GPR119Q8TDV5 335 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ACTRT2Q8TDY3 377 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 CAVIN3Q969G5 261 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 MARK4Q96L34 752 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 STACQ99469 402 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 SDF2Q99470 211 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 UBTD1Q9HAC8 227 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 DUSP22Q9NRW4 184 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 ICAM5Q9UMF0 924 aa11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 FAF1Q9UNN5 650 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-201ENST00000338427 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 NPIPB9F8W1W9 429 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 KLF4O43474 513 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 SYNGR4O95473 234 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 CPSF4O95639 269 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 HSPA4LO95757 839 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 NUDT14O95848 222 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 PLGP00747 810 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF17P17021 662 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 PRPS1L1P21108 318 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ATP6V1C1P21283 382 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 BGNP21810 368 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 MATN1P21941 496 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 SOAT1P35610 550 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ATP12AP54707 1039 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 CTBP2P56545 445 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 CLDN8P56748 225 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ABCE1P61221 599 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 GPR68Q15743 365 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 KRT71Q3SY84 523 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 WDR93Q6P2C0 686 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 EMBQ6PCB8 327 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 STAC2Q6ZMT1 411 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ANKRD46Q86W74 232 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 PPP1R14CQ8TAE6 165 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ZBTB8AQ96BR9 441 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms