RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TRBV2A0A0J9YWF9 115 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ANKRD34BA5PLL1 514 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CDC40O60508 579 aaKnown RBP eCLIP7.68□□□□□ -1.18
HPS4-201ENST00000336873 HIST1H2ABP04908 130 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 SRPRAP08240 638 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 LIPCP11150 499 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 PCSK2P16519 638 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TGFBR2P37173 567 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CAPZA2P47755 286 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 EPHA5P54756 1037 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CRMP1Q14194 572 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 FGFBP1Q14512 234 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 RPE65Q16518 533 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CDKL4Q5MAI5 379 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 AGAP6Q5VW22 663 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 FAAP20Q6NZ36 180 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 HIST3H2AQ7L7L0 130 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 VASH1Q7L8A9 365 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 BOLLQ8N9W6 283 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 OR7G2Q8NG99 324 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 OR4N2Q8NGD1 307 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 GRPEL2Q8TAA5 225 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 HIST1H2ACQ93077 130 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ITPKCQ96DU7 683 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 NEURL3Q96EH8 262 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 AGAP4Q96P64 663 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 DOK1Q99704 481 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 PBX4Q9BYU1 374 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CHST8Q9H2A9 424 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ANKHQ9HCJ1 492 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TMEM45AQ9NWC5 275 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ING1Q9UK53 422 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 IER3IP1Q9Y5U9 82 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 VPS13AQ96RL7 3174 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 FOXE1O00358 373 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 TSPAN4O14817 238 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 OLFM2O95897 454 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 DHFRP00374 187 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CSTAP01040 98 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 JUNDP17535 347 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ERVK-25P63136 954 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 FABP5Q01469 135 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 SNTA1Q13424 505 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 UBXN2BQ14CS0 331 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 PRAMEF17Q5VTA0 474 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 SLC25A25Q6KCM7 469 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 RFPL4BQ6ZWI9 263 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 PROKR2Q8NFJ6 384 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 RPLP0P6Q8NHW5 317 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TSEN15Q8WW01 171 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 GINS4Q9BRT9 223 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CLEC4MQ9H2X3 399 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 ZMAT3Q9HA38 289 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 HINT3Q9NQE9 182 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 TAS2R7Q9NYW3 318 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 APOBEC3BQ9UH17 382 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 SLC6A5Q9Y345 797 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CACNA1DQ01668 2161 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 A0A0G2JMP0 313 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CENPVL1A0A0U1RR11 272 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 A0A0X1KG70 313 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 GXYLT2A0PJZ3 443 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 NUPL2O15504 423 aaKnown RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 PRODHO43272 600 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CHST10O43529 356 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ORC5O43913 435 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CXCL10P02778 98 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TGM1P22735 817 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ZNF81P51508 661 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ENPP2Q13822 863 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 METRNLQ641Q3 311 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TMED4Q7Z7H5 227 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 CSNK1A1LQ8N752 337 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ZNF676Q8N7Q3 588 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 AVL9Q8NBF6 648 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TOR1AIP2Q8NFQ8 470 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 OR4M2Q8NGB6 313 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 OR6N2Q8NGY6 317 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 OR1E3Q8WZA6 343 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 SMPDL3BQ92485 455 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 BPIFA2Q96DR5 249 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ELP4Q96EB1 424 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 TCEAL2Q9H3H9 227 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 SYNPO2LQ9H987 977 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 ELL3Q9HB65 397 aaPredicted RBP7.68□□□□□ -1.18
HPS4-201ENST00000336873 TRIM36Q9NQ86 728 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 RALGAPA2Q2PPJ7 1873 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 VWA8A3KMH1 1905 aa7.68□□□□□ -1.18
HPS4-201ENST00000336873 GABRPO00591 440 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 NPC1O15118 1278 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 AKR7A2O43488 359 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 SCO2O43819 266 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 MOSPD3O75425 235 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 SLC25A12O75746 678 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 GSTM3P21266 225 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 SLC1A3P43003 542 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 OR1D4P47884 311 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 RAB14P61106 215 aa7.67□□□□□ -1.18
HPS4-201ENST00000336873 ILKQ13418 452 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms