RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 NLGN4YQ8NFZ3 816 aaPredicted RBP21.72■■□□□ 1.07
NDEL1-201ENST00000334527 RNF31Q96EP0 1072 aa21.72■■□□□ 1.07
NDEL1-201ENST00000334527 ALG8Q9BVK2 526 aa21.72■■□□□ 1.07
NDEL1-201ENST00000334527 ACTR10Q9NZ32 417 aa21.72■■□□□ 1.07
NDEL1-201ENST00000334527 BHLHE40O14503 412 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 HLA-DQB1P01920 261 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 BMP7P18075 431 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 NT5EP21589 574 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 QPRTQ15274 297 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 METAP1DQ6UB28 335 aaPredicted RBP21.71■■□□□ 1.07
NDEL1-201ENST00000334527 RNF113BQ8IZP6 322 aaKnown RBP21.71■■□□□ 1.07
NDEL1-201ENST00000334527 SLC7A6Q92536 515 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 HCAR1Q9BXC0 346 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 B3GAT2Q9NPZ5 323 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 NUFIP1Q9UHK0 495 aaKnown RBP21.71■■□□□ 1.07
NDEL1-201ENST00000334527 PILRAQ9UKJ1 303 aa21.71■■□□□ 1.07
NDEL1-201ENST00000334527 GTPBP1O00178 669 aaKnown RBP21.7■■□□□ 1.07
NDEL1-201ENST00000334527 FGF17O60258 216 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 RGS9O75916 674 aaPredicted RBP21.7■■□□□ 1.07
NDEL1-201ENST00000334527 LAMP2P13473 410 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 TBXA2RP21731 343 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 SYCE2Q6PIF2 218 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 FIGNL1Q6PIW4 674 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 UBASH3BQ8TF42 649 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 FN3KQ9H479 309 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 BABAM2Q9NXR7 383 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 CLDND1Q9NY35 253 aa21.7■■□□□ 1.07
NDEL1-201ENST00000334527 SIRT4Q9Y6E7 314 aaPredicted RBP21.7■■□□□ 1.07
NDEL1-201ENST00000334527 CDHR4A6H8M9 788 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 LINC01565O15544 149 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 LYPD3O95274 346 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 KLF8O95600 359 aaPredicted RBP21.7■■□□□ 1.06
NDEL1-201ENST00000334527 MAP2K3P46734 347 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 BDH1Q02338 343 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 GPR18Q14330 331 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 KLHL12Q53G59 568 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 ABI3BPQ7Z7G0 1075 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 CDRT4Q8N9R6 151 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 TMEM52Q8NDY8 209 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 SIPA1Q96FS4 1042 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 CD93Q9NPY3 652 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 PRDM9Q9NQV7 894 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 SATB2Q9UPW6 733 aa21.7■■□□□ 1.06
NDEL1-201ENST00000334527 FAM172BPA6NC97 362 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 GALP22466 123 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 CFL1P23528 166 aaKnown RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 PRPF38BQ5VTL8 546 aaKnown RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 TRIM48Q8IWZ4 208 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 RERGQ96A58 199 aaPredicted RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ARSGQ96EG1 525 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 BMFQ96LC9 184 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ZFYVE21Q9BQ24 234 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 LYRM4Q9HD34 91 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 DUSP22Q9NRW4 184 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 WBP1LQ9NX94 342 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 DAPL1A0PJW8 107 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 A6NCN8 305 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 FAM47E-STBD1D6RA91 191 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 H0YGG7 62 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ATP1B1P05026 303 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ARF3P61204 181 aaPredicted RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 EXOSC7Q15024 291 aaKnown RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ANKRD54Q6NXT1 300 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 PLET1Q6UQ28 207 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 LNX2Q8N448 690 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 OR13C2Q8NGS9 318 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 ASB12Q8WXK4 309 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 TIMP4Q99727 224 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 TTYH2Q9BSA4 534 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 RANGRFQ9HD47 186 aaPredicted RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 YBX2Q9Y2T7 364 aaKnown RBP21.69■■□□□ 1.06
NDEL1-201ENST00000334527 PCDHGB7Q9Y5F8 929 aa21.69■■□□□ 1.06
NDEL1-201ENST00000334527 S100A1P23297 94 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 EXOSC6Q5RKV6 272 aaKnown RBP21.68■■□□□ 1.06
NDEL1-201ENST00000334527 THSD4Q6ZMP0 1018 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 OR10H4Q8NGA5 316 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 OR5T3Q8NGG3 340 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 KISS1RQ969F8 398 aaPredicted RBP21.68■■□□□ 1.06
NDEL1-201ENST00000334527 BPIFA2Q96DR5 249 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 IFT27Q9BW83 186 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 KCNN2Q9H2S1 579 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 ADAM30Q9UKF2 790 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 NCKAP1Q9Y2A7 1128 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 A0A087WV62 115 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 PLOD3O60568 738 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 REM1O75628 298 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 RCBTB2O95199 551 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 PSKH1P11801 424 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 PVRP15151 417 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 PTBP1P26599 531 aaKnown RBP eCLIP21.68■■□□□ 1.063e-8■■■■■ 28.7
NDEL1-201ENST00000334527 SHC2P98077 582 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 MZT2BQ6NZ67 158 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 GLCCI1Q86VQ1 547 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 CDK20Q8IZL9 346 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 FAM3CQ92520 227 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 SPACA6W5XKT8 324 aa21.68■■□□□ 1.06
NDEL1-201ENST00000334527 SYNDIG1LA6NDD5 238 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FAM86C2PA6NEL3 165 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 TTC36A6NLP5 189 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FAM25AB3EWG3 89 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms