RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DOK6Q6PKX4 331 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 FAM183BPQ6ZVS7 135 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 COMTD1Q86VU5 262 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 PLCZ1Q86YW0 608 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 WFDC8Q8IUA0 241 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 DPP10Q8N608 796 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 OR6Y1Q8NGX8 325 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 NSMCE1Q8WV22 266 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 C4orf3Q8WVX3 66 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 SLC44A1Q8WWI5 657 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 EID2BQ96D98 161 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 TMCO6Q96DC7 493 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 ARL5BQ96KC2 179 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 TSSK3Q96PN8 268 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 CBWD1Q9BRT8 395 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 MLPHQ9BV36 600 aaPredicted RBP1.28□□□□□ -2.2
LINC00643-201ENST00000334389 TBC1D10AQ9BXI6 508 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 CEP41Q9BYV8 373 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 WWTR1Q9GZV5 400 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 FAM234AQ9H0X4 552 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 CENPHQ9H3R5 247 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 RMND5AQ9H871 391 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 AKTIPQ9H8T0 292 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 BRD7Q9NPI1 651 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 ASIC5Q9NY37 505 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 KLHL9Q9P2J3 617 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 SFMBT1Q9UHJ3 866 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 ZFP69BQ9UJL9 534 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 LEF1Q9UJU2 399 aaPredicted RBP1.28□□□□□ -2.2
LINC00643-201ENST00000334389 CAPN11Q9UMQ6 739 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 PCDHGB1Q9Y5G3 927 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.28□□□□□ -2.2
LINC00643-201ENST00000334389 WIF1Q9Y5W5 379 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 ANKRD12Q6UB98 2062 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 HIVEP1P15822 2718 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 LRP2P98164 4655 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 SPEGQ15772 3267 aa1.28□□□□□ -2.2
LINC00643-201ENST00000334389 DPRXA6NFQ7 191 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 SLC22A20A6NK97 555 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 A8MVJ9 347 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 FAM25EA8MYX2 175 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF879B4DU55 563 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ALG1L2C9J202 215 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CPLX1O14810 134 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 PFDN6O15212 129 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 TP73O15350 636 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ZIC3O60481 467 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 IFNA6P05013 189 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ELANEP08246 267 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 S1PR1P21453 382 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 GNRHRP30968 328 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 GRIA1P42261 906 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 PIK3CGP48736 1102 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 UBE2E1P51965 193 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 UBE2HP62256 183 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 FKBP3Q00688 224 aaKnown RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 HIST3H3Q16695 136 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CLEC16AQ2KHT3 1053 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 SFT2D3Q587I9 215 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CEMP1Q6PRD7 247 aaPredicted RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ETV3LQ6ZN32 361 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 VN1R4Q7Z5H5 301 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CNTRLQ7Z7A1 2325 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CBWD2Q8IUF1 395 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 LYPD1Q8N2G4 141 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 EIF1ADQ8N9N8 165 aaKnown RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CATSPER1Q8NEC5 780 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 DMBX1Q8NFW5 382 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 OR11H6Q8NGC7 330 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 STK35Q8TDR2 534 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 PTPMT1Q8WUK0 201 aaPredicted RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ASB9Q96DX5 294 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM237Q96Q45 408 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 SLC38A2Q96QD8 506 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 CSF3RQ99062 836 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 HGH1Q9BTY7 390 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 MRI1Q9BV20 369 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 OSBPL11Q9BXB4 747 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ACTRT3Q9BYD9 372 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 REXO4Q9GZR2 422 aaKnown RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 TKTL2Q9H0I9 626 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 WWP1Q9H0M0 922 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 GBA3Q9H227 469 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 MSL2Q9HCI7 577 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 RRAGDQ9NQL2 400 aaPredicted RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 HPF1Q9NWY4 346 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 GALPQ9UBC7 116 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 KCNG2Q9UJ96 466 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 RASD1Q9Y272 281 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 DRG1Q9Y295 367 aaKnown RBP1.28□□□□□ -2.21
LINC00643-201ENST00000334389 TENM3Q9P273 2699 aa1.28□□□□□ -2.21
LINC00643-201ENST00000334389 ABCA4P78363 2273 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 CENPVL1A0A0U1RR11 272 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 MAGEB16A2A368 324 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM150BA6NC51 233 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 PRAMEF25A6NGN4 478 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 E9PMD0 336 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 GUCY1B2O75343 617 aa1.27□□□□□ -2.21
LINC00643-201ENST00000334389 PRKD3O94806 890 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms