RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 KLHL12Q53G59 568 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 PRRT3Q5FWE3 981 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 GJD3Q8N144 294 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 VWA5B2Q8N398 1253 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 AP3S1Q92572 193 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 PTP4A1Q93096 173 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 RNF121Q9H920 327 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 H2AFY2Q9P0M6 372 aaPredicted RBP12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 ZNF223Q9UK11 482 aaPredicted RBP12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 FANCMQ8IYD8 2048 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 GSAPA4D1B5 854 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 FGF17O60258 216 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 CT62P0C5K7 136 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 NOS3P29474 1203 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 RFX3P48380 749 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 LSSP48449 732 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 DUSP8Q13202 625 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 Q5BKY6 102 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 IL20RBQ6UXL0 311 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 STARD5Q9NSY2 213 aa12.46□□□□□ -0.41
TUBA1B-201ENST00000332858 FAM47E-STBD1D6RA91 191 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 BHLHE40O14503 412 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 HCRTR1O43613 425 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 ADAM11O75078 769 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 LYPD3O95274 346 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 CHRNB1P11230 501 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 IFI30P13284 250 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 IL9P15248 144 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 UGT2B7P16662 529 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 FHL5Q5TD97 284 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 SYCE2Q6PIF2 218 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 FBXO46Q6PJ61 603 aaPredicted RBP12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 BMFQ96LC9 184 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 DEPDC7Q96QD5 511 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 PAQR5Q9NXK6 330 aaPredicted RBP12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 CLDND1Q9NY35 253 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 SLC22A7Q9Y694 548 aa12.46□□□□□ -0.42
TUBA1B-201ENST00000332858 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 TRAV27A0A087WT01 109 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 GXYLT2A0PJZ3 443 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 UNC119BA6NIH7 251 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 CENPXA8MT69 81 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 GTPBP1O00178 669 aaKnown RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 RGS13O14921 159 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 CTSBP07858 339 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 PSKH1P11801 424 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 ACSL1P33121 698 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 PPP3R1P63098 170 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 MRPS15P82914 257 aaKnown RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 DCST2Q5T1A1 773 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 NIPAL3Q6P499 406 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR13C2Q8NGS9 318 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 NT5CQ8TCD5 201 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 NR4A3Q92570 626 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 FRMD6Q96NE9 622 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR2B2Q9GZK3 357 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 ZNF350Q9GZX5 532 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 NLKQ9UBE8 527 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 RASGRP1O95267 797 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 ELK1P19419 428 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 EN2P19622 333 aaPredicted RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 SLC16A1P53985 500 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 GPR18Q14330 331 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 RPTNQ6XPR3 784 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 DGAT2L6Q6ZPD8 337 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 USP53Q70EK8 1073 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 CYB561A3Q8NBI2 242 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR52N1Q8NH53 320 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR51A7Q8NH64 312 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 FANK1Q8TC84 345 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 TMEM239Q8WW34 195 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 RNF170Q96K19 258 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 NECTIN4Q96NY8 510 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 ALG8Q9BVK2 526 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 OR51V1Q9H2C8 321 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 MEPEQ9NQ76 525 aaPredicted RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 USP36Q9P275 1121 aaKnown RBP12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 ALPK2Q86TB3 2170 aa12.45□□□□□ -0.42
TUBA1B-201ENST00000332858 EPOPA6NHQ4 379 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 RNF13O43567 381 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 KCNJ13O60928 360 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 GYPBP06028 91 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 SHC1P29353 583 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 RPS5P46782 204 aaKnown RBP12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 E2F1Q01094 437 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 FIGLAQ6QHK4 219 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 ENKURQ8TC29 256 aa12.44□□□□□ -0.42
TUBA1B-201ENST00000332858 GRHL3Q8TE85 626 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms