RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NR4A3Q92570 626 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 DSN1Q9H410 356 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 Q9N2J8 555 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 MKKSQ9NPJ1 570 aaPredicted RBP18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 CTSFQ9UBX1 484 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 A0A087WUU8 490 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 TCRBV16S1A1N1A0A5B0 115 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 CDHR4A6H8M9 788 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 PRKNO60260 465 aaPredicted RBP18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 NTN1O95631 604 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 THY1P04216 161 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 GKN3PP0CG01 181 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 PRG2P13727 222 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 DUSP3P51452 185 aaPredicted RBP18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 CRISP1P54107 249 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 ST3GAL3Q11203 375 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 NSDHLQ15738 373 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 PHF19Q5T6S3 580 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 PWWP2BQ6NUJ5 590 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 ATOH1Q92858 354 aaPredicted RBP18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 GFM1Q96RP9 751 aaKnown RBP18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 VN1R1Q9GZP7 353 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 PRODH2Q9UF12 536 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 RARRES3Q9UL19 164 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 MKL2Q9ULH7 1088 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 CLCA3PQ9Y6N3 262 aa18.74■□□□□ 0.59
RIPPLY3-201ENST00000329553 GUSBP08236 651 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 MMP11P24347 488 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 UGT2B15P54855 530 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 SLC37A1P57057 533 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 RPS3AP61247 264 aaKnown RBP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 PLAURQ03405 335 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 TRAM2Q15035 370 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 PLEKHM3Q6ZWE6 761 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 SLITRK4Q8IW52 837 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZSCAN1Q8NBB4 408 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 DACH2Q96NX9 599 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 OR8D2Q9GZM6 311 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 DCSTAMPQ9H295 470 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 SIDT1Q9NXL6 827 aaKnown RBP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZNF226Q9NYT6 803 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 FTSJ1Q9UET6 329 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 NUP210LQ5VU65 1888 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 IGFBP1P08833 259 aaPredicted RBP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 OSMP13725 252 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 IDH2P48735 452 aaKnown RBP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 FOXL2P58012 376 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 PDZK1Q5T2W1 519 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 GPA33Q99795 319 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZBTB20Q9HC78 741 aaPredicted RBP18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 OCIAD1Q9NX40 245 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 ENOPH1Q9UHY7 261 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 CBLCQ9ULV8 474 aa18.73■□□□□ 0.59
RIPPLY3-201ENST00000329553 AIREO43918 545 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 SCRG1O75711 98 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 DDAH2O95865 285 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 POU1F1P28069 291 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 PPP5CP53041 499 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 ELAVL1Q15717 326 aaKnown RBP18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 TIGD6Q17RP2 521 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 C1orf94Q6P1W5 598 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 SHISA6Q6ZSJ9 500 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 GDF7Q7Z4P5 450 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 NKAIN4Q8IVV8 208 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 DEPDC4Q8N2C3 294 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 LINC00471Q8N535 108 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 BCORP1Q8N888 145 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 SLC41A3Q96GZ6 507 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 POLR2J3Q9H1A7 115 aaKnown RBP18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 APMAPQ9HDC9 416 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 AMBNQ9NP70 447 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 OR10H1Q9Y4A9 318 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZAR1LA6NP61 321 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 NTN3O00634 580 aaPredicted RBP18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 IGKV3-11P04433 115 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 IFNA8P32881 189 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 CLK1P49759 484 aaKnown RBP18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 ILKQ13418 452 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 PLEKHG7Q6ZR37 379 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 SLC46A3Q7Z3Q1 461 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZNF614Q8N883 585 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 MCFD2Q8NI22 146 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 SLC2A12Q8TD20 617 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 ZNF721Q8TF20 911 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 MMP27Q9H306 513 aa18.72■□□□□ 0.59
RIPPLY3-201ENST00000329553 TTC36A6NLP5 189 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 DYRK3O43781 588 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 OR5F1O95221 314 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 SOX14O95416 240 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 HTR2AP28223 471 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 RORAP35398 523 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 PRICKLE2Q7Z3G6 844 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 MEX3DQ86XN8 651 aaKnown RBP18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 STT3BQ8TCJ2 826 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 ANKRD19PQ9H560 264 aa18.71■□□□□ 0.59
RIPPLY3-201ENST00000329553 METTL15A6NJ78 407 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 D6RAR5 112 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 NPIPB9F8W1W9 429 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 KHNYNO15037 678 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms