RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MMEL1Q495T6 779 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 TCHHL1Q5QJ38 904 aaPredicted RBP5.96□□□□□ -1.46
CSTF3-201ENST00000323959 CASC10Q5T4H9 136 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 C1orf146Q5VVC0 180 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 FAM71E1Q6IPT2 247 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 C17orf107Q6ZR85 190 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 C17orf64Q86WR6 236 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 MFSD9Q8NBP5 474 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 OR2A1Q8NGT9 310 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 HUS1BQ8NHY5 278 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 WFDC12Q8WWY7 111 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 STMN2Q93045 179 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ANKRD9Q96BM1 317 aaPredicted RBP5.96□□□□□ -1.46
CSTF3-201ENST00000323959 TM4SF19Q96DZ7 209 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 PLPPR2Q96GM1 343 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 TEX37Q96LM6 180 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 FERD3LQ96RJ6 166 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 CDRT15Q96T59 188 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 CGREF1Q99674 301 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF717Q9BY31 904 aaPredicted RBP5.96□□□□□ -1.46
CSTF3-201ENST00000323959 VN1R1Q9GZP7 353 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 DDX31Q9H8H2 851 aaKnown RBP5.96□□□□□ -1.46
CSTF3-201ENST00000323959 CMTM6Q9NX76 183 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ASF1AQ9Y294 204 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 B3GALT5Q9Y2C3 310 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 POLR3HQ9Y535 204 aaPredicted RBP5.96□□□□□ -1.46
CSTF3-201ENST00000323959 AIM2O14862 343 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SEC22BO75396 215 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TBX6O95947 436 aaPredicted RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 FCGR1AP12314 374 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RPL38P63173 70 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF763Q0D2J5 394 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF672Q499Z4 452 aaPredicted RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 NIPAL1Q6NVV3 410 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ERICH5Q6P6B1 374 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PAGE2Q7Z2X7 111 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 DHDDSQ86SQ9 333 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SPNS2Q8IVW8 549 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TBC1D19Q8N5T2 526 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 METTL25Q8N6Q8 603 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 LINC01555Q8NAE3 123 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 C7orf57Q8NEG2 295 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ADCY4Q8NFM4 1077 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 OR5AR1Q8NGP9 310 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ESAMQ96AP7 390 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RNF145Q96MT1 663 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 CPPED1Q9BRF8 314 aaPredicted RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ROGDIQ9GZN7 287 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 AURKAIP1Q9NWT8 199 aaPredicted RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF639Q9UID6 485 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 C1orf226A1L170 272 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 C5orf63A6NC05 138 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PRORSD1PA6NEY8 169 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 NR5A2O00482 541 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 GUSBP08236 651 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SMIM10L1P0DMW3 83 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 POU2F1P14859 743 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 GPX2P18283 190 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 HPCAL1P37235 193 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 CRYZQ08257 329 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 FAPQ12884 760 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 GGTLC2Q14390 218 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TAF11Q15544 211 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PAGE3Q5JUK9 113 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 DEPDC1Q5TB30 811 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 AGAP6Q5VW22 663 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 MRM1Q6IN84 353 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 NANOGP8Q6NSW7 305 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SHQ1Q6PI26 577 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TMIGD1Q6UXZ0 262 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 CCDC80Q76M96 950 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TMEM156Q8N614 296 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ANKFN1Q8N957 763 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 C9orf106Q8NAJ2 232 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PPFIBP2Q8ND30 876 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SRFBP1Q8NEF9 429 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SMIM10Q96HG1 83 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 REXO5Q96IC2 774 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RAD21L1Q9H4I0 556 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 NANOGQ9H9S0 305 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 FARSBQ9NSD9 589 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ATAD3AQ9NVI7 634 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RIMS3Q9UJD0 308 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SPEF1Q9Y4P9 236 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PCDHGB5Q9Y5G0 923 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SNX13Q9Y5W8 968 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 MED12Q93074 2177 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 OR2A25A4D2G3 310 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 DPPA5A6NC42 116 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ENTPD5O75356 428 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SLITRK5O94991 958 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 BCL10O95999 233 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 GGT1P19440 569 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 BSGP35613 385 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 HSPA13P48723 471 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 CDH15P55291 814 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RPS15AP62244 130 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 FAM27E3Q08E93 113 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 SF3A3Q12874 501 aaKnown RBP eCLIP5.95□□□□□ -1.462e-13■□□□□ 8.8
CSTF3-201ENST00000323959 FLOT2Q14254 428 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms