RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 HHATLQ9HCP6 504 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR6C2Q9NZP2 312 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 PCP4L1A6NKN8 68 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 PRKRAO75569 313 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 SHC1P29353 583 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 CSNK1G2P78368 415 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 SMCO1Q147U7 214 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 PRICKLE2Q7Z3G6 844 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 CREB3L4Q8TEY5 395 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ABRACLQ9P1F3 81 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 IER3IP1Q9Y5U9 82 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 K7ESM1 405 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 FZD7O75084 574 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 INHBBP09529 407 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 CPEP16870 476 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 FPR3P25089 353 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 RBMS1P29558 406 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ETV6P41212 452 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 MTNR1BP49286 362 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 E2F1Q01094 437 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 OR1Q1Q15612 314 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 KLHL26Q53HC5 615 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 MTFR2Q6P444 385 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 BEST4Q8NFU0 473 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 PMEPA1Q969W9 287 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 MED20Q9H944 212 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 PRODH2Q9UF12 536 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 SOCS6O14544 535 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 RNH1P13489 461 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 IRS1P35568 1242 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 DCST2Q5T1A1 773 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 C18orf63Q68DL7 685 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ARMC10Q8N2F6 343 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ZFYVE21Q9BQ24 234 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 SIDT1Q9NXL6 827 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ARID1BQ8NFD5 2236 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 GAPDHSO14556 408 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 PRAF2O60831 178 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 VAMP1P23763 118 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 RACK1P63244 317 aaKnown RBP13.79□□□□□ -0.2
TCOF1-201ENST00000323668 BAK1Q16611 211 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 ANKRD19PQ9H560 264 aa13.79□□□□□ -0.2
TCOF1-201ENST00000323668 TRAV27A0A087WT01 109 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 KCNK2O95069 426 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 RNF113BQ8IZP6 322 aaKnown RBP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SDR9C7Q8NEX9 313 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 POTEKPQ9BYX7 375 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 GALNT9Q9HCQ5 603 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 NAP1L6A6NFF2 107 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 OR7A10O76100 309 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TFP02787 698 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PRKAR1BP31321 381 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TECPR1Q7Z6L1 1165 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 ADIPOR2Q86V24 386 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 COMMD7Q86VX2 200 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SLC35F2Q8IXU6 374 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 OR2L8Q8NGY9 312 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 THAP6Q8TBB0 222 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TSACCQ96A04 125 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TIMM29Q9BSF4 260 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SLC6A15Q9H2J7 730 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PLEKHA1Q9HB21 404 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 B4DXG7 233 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 FABP7O15540 132 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TMPRSS11DO60235 418 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PRKCAP17252 672 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 GARNL3Q5VVW2 1013 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 APH1BQ8WW43 257 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 UBQLN3Q9H347 655 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SAGE1Q9NXZ1 904 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 TAS2R8Q9NYW2 309 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PTTG3PQ9NZH4 202 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 SERTM1A2A2V5 107 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PSMD9O00233 223 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 PTBP1P26599 531 aaKnown RBP eCLIP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 P2RY2P41231 377 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 DUSP6Q16828 381 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF750Q32MQ0 723 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 KCTD18Q6PI47 426 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 RIT1Q92963 219 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
TCOF1-201ENST00000323668 ABCG4Q9H172 646 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms