RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GPR171O14626 319 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 BET1O15155 118 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ERI3O43414 337 aaKnown RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 AIFM1O95831 613 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 RPN2P04844 631 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 FUT1P19526 365 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 F8A1P23610 371 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PDX1P52945 283 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ST8SIA6P61647 398 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PRR5P85299 388 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 CD276Q5ZPR3 534 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PYHIN1Q6K0P9 492 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 MEPCEQ7L2J0 689 aaKnown RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 C12orf40Q86WS4 652 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 ACOT4Q8N9L9 421 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 OR9A2Q8NGT5 310 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 TRIM36Q9NQ86 728 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 RABL2AQ9UBK7 228 aaPredicted RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 SLC7A7Q9UM01 511 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ENTPD4Q9Y227 616 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 NUBP2Q9Y5Y2 271 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 NUMA1Q14980 2115 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 EMC8O43402 210 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 CD3GP09693 182 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 HIST1H1TP22492 207 aaPredicted RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 DNASE1P24855 282 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 BCL6P41182 706 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 CDC73Q6P1J9 531 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 CEACAM19Q7Z692 300 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ADGRG3Q86Y34 549 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 GID4Q8IVV7 300 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 DACT3Q96B18 629 aaPredicted RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 ARMC5Q96C12 935 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 ELP4Q96EB1 424 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 WBP1Q96G27 269 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 COX14Q96I36 57 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 XKR8Q9H6D3 395 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 LIN7BQ9HAP6 207 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 DLL4Q9NR61 685 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 KLHL28Q9NXS3 571 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 CES1P1Q9UKY3 287 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 CLEC4AQ9UMR7 237 aa12.51□□□□□ -0.41
SKA3-202ENST00000314759 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
SKA3-202ENST00000314759 A0A1W2PPL8 197 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 REM1O75628 298 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 HOXD10P28358 340 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 HSF2Q03933 536 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 MRM1Q6IN84 353 aaKnown RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 MTFR2Q6P444 385 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 SIAH3Q8IW03 269 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 C17orf47Q8NEP4 570 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 OR10H4Q8NGA5 316 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 OR2A1Q8NGT9 310 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 ABHD4Q8TB40 342 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 GANCQ8TET4 914 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 KAT2AQ92830 837 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 NXPE3Q969Y0 559 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 MOAP1Q96BY2 351 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 NXPE2Q96DL1 559 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 C12orf66Q96MD2 445 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 OR2M2Q96R28 347 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 MS4A7Q9GZW8 240 aaPredicted RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 G3V3Q6 166 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 PLPP2O43688 288 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 FGF18O76093 207 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 OR5F1O95221 314 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 CXCL14O95715 111 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 CSNK2A2P19784 350 aaPredicted RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 ZP1P60852 638 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 AGERQ15109 404 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 LTB4RQ15722 352 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 ZIC1Q15915 447 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 TMEM35AQ53FP2 167 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 ERN2Q76MJ5 926 aaKnown RBP12.5□□□□□ -0.41
SKA3-202ENST00000314759 LRRTM4Q86VH4 590 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 PPA2Q9H2U2 334 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 OR52D1Q9H346 318 aa12.5□□□□□ -0.41
SKA3-202ENST00000314759 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms