RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NNATQ16517 81 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF385CQ66K41 422 aaPredicted RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 GTF2IRD2BQ6EKJ0 949 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF613Q6PF04 617 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 MBOAT2Q6ZWT7 520 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 PRICKLE2Q7Z3G6 844 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 GTF2IRD2Q86UP8 949 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 LAPTM4BQ86VI4 370 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ALDH16A1Q8IZ83 802 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 SLC38A9Q8NBW4 561 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 OR13F1Q8NGS4 319 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 PIGXQ8TBF5 258 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 CNOT9Q92600 299 aaKnown RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ADIPOR1Q96A54 375 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 GFM1Q96RP9 751 aaKnown RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF559Q9BR84 538 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 RHNO1Q9BSD3 238 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 SLC7A5P2Q9GIP4 190 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 OR8D2Q9GZM6 311 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 DNAJB12Q9NXW2 375 aaKnown RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ERVK-18Q9QC07 812 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 RSL24D1Q9UHA3 163 aaKnown RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 PSORS1C1Q9UIG5 152 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 SLC7A7Q9UM01 511 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 SH3D21A4FU49 640 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 FRG2CA6NGY1 282 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 A8MUA0 341 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 H3BN98 237 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 POLR1CO15160 346 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 RGS10O43665 173 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 SCRG1O75711 98 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 NTN1O95631 604 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 HBQ1P09105 142 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 FPR3P25089 353 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 POU1F1P28069 291 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 CDK5Q00535 292 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TRA2AQ13595 282 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TUBA3CQ13748 450 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 NKAIN1Q4KMZ8 207 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM201Q5SNT2 666 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PWWP2BQ6NUJ5 590 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 DBX2Q6ZNG2 339 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 RASSF6Q6ZTQ3 369 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 RRM2BQ7LG56 351 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PRSS48Q7RTY5 328 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 BPHLQ86WA6 291 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 KIF18BQ86Y91 864 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 POGLUT1Q8NBL1 392 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF540Q8NDQ6 660 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 STT3BQ8TCJ2 826 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM255BQ8WV15 326 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TRUB1Q8WWH5 349 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 DAZLQ92904 295 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 MUL1Q969V5 352 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 MYCBPQ99417 103 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 TSC22D3Q99576 134 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 NUDT9Q9BW91 350 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 SLC25A19Q9HC21 320 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PTTG2Q9NZH5 202 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF223Q9UK11 482 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 MKL2Q9ULH7 1088 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PCDHGB2Q9Y5G2 931 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 COMMD3-BMI1R4GMX3 469 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 M0R129 80 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 IL33O95760 270 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZGLP1P0C6A0 271 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 FGF5P12034 268 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 DCKP27707 260 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 GSTT1P30711 240 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 MASP1P48740 699 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 RNF144AP50876 292 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 DCAF7P61962 342 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 MVKQ03426 396 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 EMX1Q04741 257 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZFP36L1Q07352 338 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 EBPQ15125 230 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PHF19Q5T6S3 580 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 WDR88Q6ZMY6 472 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PTCHD4Q6ZW05 846 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 AHSA2Q719I0 299 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PPP1R3BQ86XI6 285 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 NRMQ8IXM6 262 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 PRSS58Q8IYP2 241 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 SVOPQ8N4V2 548 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF614Q8N883 585 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 OR1N1Q8NGS0 311 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF420Q8TAQ5 688 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 FAM46AQ96IP4 442 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 LCORQ96JN0 433 aaPredicted RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 DOK1Q99704 481 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 EDEM2Q9BV94 578 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 LHPPQ9H008 270 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
TRIM40-205ENST00000307859 SMOC1Q9H4F8 434 aa10.95□□□□□ -0.66
TRIM40-205ENST00000307859 HELZ2Q9BYK8 2649 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms