RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CASP6P55212 293 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 ZNF691Q5VV52 312 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 RFLNAQ6ZTI6 216 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 WDR53Q7Z5U6 358 aaPredicted RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 L3MBTL4Q8NA19 623 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 LRIT1Q9P2V4 623 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SPEF1Q9Y4P9 236 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 FNTBP49356 437 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SFRP4Q6FHJ7 346 aaPredicted RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 SRPX2O60687 465 aaPredicted RBP14.96□□□□□ -0.02
USP42-201ENST00000306177 CCNJQ5T5M9 372 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 FRMPD2BQ6IN97 320 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 ADAMTSL4Q6UY14 1074 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 BEST3Q8N1M1 668 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 ZNF417Q8TAU3 575 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 ADOQ96SZ5 270 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 HDAC8Q9BY41 377 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 CA5BQ9Y2D0 317 aa14.96□□□□□ -0.02
USP42-201ENST00000306177 LINC01553A4QN01 128 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 MMP12P39900 470 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 PRKXP51817 358 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 C17orf50Q8WW18 174 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 LMF1Q96S06 567 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 OR2B2Q9GZK3 357 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 ASB4Q9Y574 426 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TRAV18A0A075B6X5 111 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TMEM225BP0DP42 221 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 PTGS2P35354 604 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 COQ8AQ8NI60 647 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TMEM163Q8TC26 289 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 PTRH2Q9Y3E5 179 aaKnown RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 TRIM64A6NGJ6 449 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 H0YGG7 62 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 GFRA2O00451 464 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 NARSO43776 548 aaKnown RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 TOXO94900 526 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 AMY2AP04746 511 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 CA5AP35218 305 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 ARF3P61204 181 aaPredicted RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 ERVK-25P63136 954 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TLDC1Q6P9B6 456 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 SBSNQ6UWP8 590 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 MEX3DQ86XN8 651 aaKnown RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 OR9A4Q8NGU2 314 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 OR2T11Q8NH01 316 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 SCGB1C1Q8TD33 95 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TBC1D20Q96BZ9 403 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 DDX31Q9H8H2 851 aaKnown RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 INIPQ9NRY2 104 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 ZNF337Q9Y3M9 751 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 BPNT1O95861 308 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 TACR1P25103 407 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 AGTR1P30556 359 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 OR1Q1Q15612 314 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 LPAL2Q16609 132 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 COL28A1Q2UY09 1125 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 WBP2NLQ6ICG8 309 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 SLCO4C1Q6ZQN7 724 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 SHISA6Q6ZSJ9 500 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 RETREG3Q86VR2 466 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 VN1R2Q8NFZ6 395 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 NAT6Q93015 286 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 TCTN2Q96GX1 697 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 UBQLN4Q9NRR5 601 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 SACM1LQ9NTJ5 587 aa14.95□□□□□ -0.02
USP42-201ENST00000306177 RPH3AQ9Y2J0 694 aaPredicted RBP14.95□□□□□ -0.02
USP42-201ENST00000306177 SNU13P55769 128 aaKnown RBP14.94□□□□□ -0.02
USP42-201ENST00000306177 OR7A5Q15622 319 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 C3P1Q6ZMU1 363 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 INTS14Q96SY0 518 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TESQ9UGI8 421 aaKnown RBP14.94□□□□□ -0.02
USP42-201ENST00000306177 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.94□□□□□ -0.02
USP42-201ENST00000306177 SULT2B1O00204 365 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 MEN1O00255 615 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 B4GAT1O43505 415 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 DNAJB6O75190 326 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 IGFBP6P24592 240 aaPredicted RBP14.94□□□□□ -0.02
USP42-201ENST00000306177 DCAF7P61962 342 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 PGGHGQ32M88 737 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TRIM46Q7Z4K8 759 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 IGFN1Q86VF2 1251 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 OR51E2Q9H255 320 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 CPNE5Q9HCH3 593 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TTLL8A6PVC2 850 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 LYRM1O43325 122 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 CD63P08962 238 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 SLC2A5P22732 501 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TNFRSF17Q02223 184 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TAP2Q03519 686 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 B3GNT8Q7Z7M8 397 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 LIX1LQ8IVB5 337 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 ZNF595Q8IYB9 648 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 TREX2Q9BQ50 279 aaPredicted RBP14.94□□□□□ -0.02
USP42-201ENST00000306177 POU2F3Q9UKI9 436 aa14.94□□□□□ -0.02
USP42-201ENST00000306177 hCG_1807616A0A1W2PRN6 198 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms