RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 RUNX2Q13950 521 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 C6orf15Q6UXA7 325 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 BORCS6Q96GS4 357 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 URM1Q9BTM9 101 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 RPP25Q9BUL9 199 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SLC12A9Q9BXP2 914 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 NFAT5O94916 1531 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 F3P13726 295 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 NTRK2Q16620 822 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TMEM44Q2T9K0 475 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF468Q5VIY5 522 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 RABEPKQ7Z6M1 372 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF695Q8IW36 515 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PGBD5Q8N414 524 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF740Q8NDX6 193 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 RHBDF1Q96CC6 855 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 UBXN10Q96LJ8 280 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PADI1Q9ULC6 663 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ANKRD26Q9UPS8 1709 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TMEM202A6NGA9 273 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF705EA8MWA4 302 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 HLA-DPB1P04440 258 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 MTHFD2P13995 350 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SLC22A6Q4U2R8 563 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 COX15Q7KZN9 410 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 LILRB2Q8N423 598 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ACBD4Q8NC06 268 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TAMM41Q96BW9 452 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PREBQ9HCU5 417 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PCDHB16Q9NRJ7 776 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PCTPQ9UKL6 214 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 USP22Q9UPT9 525 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 POM121BA6NF01 834 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PABPC4LP0CB38 370 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 GNB3P16520 340 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TAZQ16635 292 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PLA1AQ53H76 456 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 DCP2Q8IU60 420 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PRR7Q8TB68 274 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 NUDT8Q8WV74 236 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TBC1D20Q96BZ9 403 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 HHIPL1Q96JK4 782 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SSX3Q99909 188 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 A0A096LPE4 126 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 A0A1W2PPZ6 126 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 A0A1W2PR80 420 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 GOSR2O14653 212 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TBX10O75333 385 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 CXCR4P61073 352 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 VN1R2Q8NFZ6 395 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SLC22A4Q9H015 551 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 EGLN3Q9H6Z9 239 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 WDR76Q9H967 626 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PPM1BO75688 479 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 S100A2P29034 98 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 CRISP1P54107 249 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SERTAD2Q14140 314 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 HBMQ6B0K9 141 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 OR7E24Q6IFN5 339 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 GPR149Q86SP6 731 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 BAIAP2Q9UQB8 552 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 HS3ST1O14792 307 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 BCAS2O75934 225 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ANXA3P12429 323 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 CHRNB4P30926 498 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ADARB1P78563 741 aaKnown RBP7.3□□□□□ -1.24
SCN9A-201ENST00000303354 MMP21Q8N119 569 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 NDNFQ8TB73 568 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ANTXRLA6NF34 631 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 PDE7AQ13946 482 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 GNMTQ14749 295 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ANKRD16Q6P6B7 361 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 AAED1Q7RTV5 226 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 CCDC36Q8IYA8 594 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 FEVQ99581 238 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 EMC6Q9BV81 110 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 SARGQ9BW04 601 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 DNAJC15Q9Y5T4 150 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 NWD2Q9ULI1 1742 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 SAGE2PA6NJ88 616 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 CLCA4Q14CN2 919 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ESCO2Q56NI9 601 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 UNQ6126/PRO20091Q6UXV3 157 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 DMBX1Q8NFW5 382 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF480Q8WV37 535 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 TMEM239Q8WW34 195 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 RRNAD1Q96FB5 475 aaKnown RBP7.3□□□□□ -1.24
SCN9A-201ENST00000303354 KLHL42Q9P2K6 505 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 SNX11Q9Y5W9 270 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 IGKV6-21A0A0C4DH24 114 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 A0A0G2JPF8 293 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 HNRNPCL3B7ZW38 293 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 FAAHO00519 579 aa7.3□□□□□ -1.24
SCN9A-201ENST00000303354 HSD17B6O14756 317 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms