RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ERMAPQ96PL5 475 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 TMEM43Q9BTV4 400 aa12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 UBQLN3Q9H347 655 aa12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 MARK1Q9P0L2 795 aa12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 CACNG2Q9Y698 323 aa12.42□□□□□ -0.42
TNFRSF21-201ENST00000296861 C1QTNF3-AMACRE9PGA6 284 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 LGI1O95970 557 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 SOD1P00441 154 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 UCHL1P09936 223 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ANXA3P12429 323 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 PCSK2P16519 638 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 TEAD1P28347 426 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RPS27P42677 84 aaKnown RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 PITPNBP48739 271 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 CRMP1Q14194 572 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OCLNQ16625 522 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OAFQ86UD1 273 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 METTL27Q8N6F8 245 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR4D9Q8NGE8 314 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF514Q96K75 400 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR51J1Q9H342 316 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RNF13O43567 381 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR10H2O60403 315 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RGS9O75916 674 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ADH1CP00326 375 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 APEHP13798 732 aaKnown RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 POLR2CP19387 275 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 TSPAN31Q12999 210 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RNF165Q6ZSG1 346 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 GDF7Q7Z4P5 450 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 CPA6Q8N4T0 437 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 FRMD1Q8N878 549 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 C17orf47Q8NEP4 570 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 GHSRQ92847 366 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ABHD1Q96SE0 405 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ARHGAP9Q9BRR9 750 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RNF32Q9H0A6 362 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 AUNIPQ9H7T9 357 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 C12orf4Q9NQ89 552 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 C20orf141Q9NUB4 165 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RPS6KB2Q9UBS0 482 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 FZD7O75084 574 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR7A10O76100 309 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 KDM4BO94953 1096 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 PGDP52209 483 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ARHGDIBP52566 201 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 DEFB110Q30KQ9 67 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 TRMT12Q53H54 448 aaKnown RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF322Q6U7Q0 402 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 LCTLQ6UWM7 567 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR8S1Q8NH09 359 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RNF170Q96K19 258 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 MICU1Q9BPX6 476 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 MAN2C1Q9NTJ4 1040 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZSCAN32Q9NX65 697 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF21-201ENST00000296861 FXYD6-FXYD2A0A087WZ82 144 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 NPIPB8E9PQR5 432 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 BLOC1S5-TXNDC5H3BN57 136 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 DOK2O60496 412 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 STX11O75558 287 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 KLHL18O94889 574 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 MT-ND5P03915 603 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ALDOBP05062 364 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HMGN1P05114 100 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 GABRA3P34903 492 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ACTR1BP42025 376 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ACTR1AP61163 376 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 CDK3Q00526 305 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF33BQ06732 778 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF155Q12901 538 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SFXN4Q6P4A7 337 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 RASSF6Q6ZTQ3 369 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 COMMD7Q86VX2 200 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR52E1Q8NGJ3 308 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HCAR2Q8TDS4 363 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 GIMAP1Q8WWP7 306 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 CAMK1GQ96NX5 476 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SEMA4CQ9C0C4 833 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 FXYD6Q9H0Q3 95 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 RCE1Q9Y256 329 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SCN8AQ9UQD0 1980 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 LRIT2A6NDA9 550 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 EMC8O43402 210 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SIX6O95475 246 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HLA-DQA2P01906 255 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF888P0CJ79 500 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HLA-DMAP28067 261 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms