RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 PRSS3P35030 304 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SPOCK1Q08629 439 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 YIF1BQ5BJH7 314 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SFRP5Q5T4F7 317 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 C9orf135Q5VTT2 229 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 LIPIQ6XZB0 460 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 CCDC71LQ8N9Z2 235 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 NUDT22Q9BRQ3 303 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 APMAPQ9HDC9 416 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 NIT2Q9NQR4 276 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 PPP1R14DQ9NXH3 145 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ANKRD28O15084 1053 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PROZP22891 400 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 CD68P34810 354 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 METTL11BQ5VVY1 283 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 OR52E8Q6IFG1 317 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 TSPYL5Q86VY4 417 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ALDH16A1Q8IZ83 802 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 LMNTD1Q8N9Z9 388 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ADAMTS19Q8TE59 1207 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PCYT2Q99447 389 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 HAPLN2Q9GZV7 340 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 APOBEC3BQ9UH17 382 aaKnown RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 TCHHQ07283 1943 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 SOCS6O14544 535 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 DUX1O43812 170 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 FBXO24O75426 580 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 NOX3Q9HBY0 568 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 WASH6PQ9NQA3 447 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 SLC6A5Q9Y345 797 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 HOXB5P09067 269 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PRDX3P30048 256 aaKnown RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 CXCR4P61073 352 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PLCXD3Q63HM9 321 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 VRK2Q86Y07 508 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 OR7G1Q8NGA0 311 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 TRIB3Q96RU7 358 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 GABRQQ9UN88 632 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 WASH4PA8MWX3 477 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 CYTIPO60759 359 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 STK17BO94768 372 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 RAB28P51157 221 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF169Q14929 603 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PRAMEF8Q5VWM4 474 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PRAMEF7Q5VXH5 474 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 HEPHL1Q6MZM0 1159 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 UNQ6126/PRO20091Q6UXV3 157 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 GDPD1Q8N9F7 314 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 OR2T4Q8NH00 348 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 SFXN5Q8TD22 340 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 DAZLQ92904 295 aaKnown RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 NAA50Q9GZZ1 169 aaKnown RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 MED20Q9H944 212 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 LIPT1Q9Y234 373 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 FAM183AA6NL82 134 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF736B4DX44 427 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-202ENST00000293880 OR5M10Q6IEU7 315 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 FIGLAQ6QHK4 219 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF461Q8TAF7 563 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 ACOT13Q9NPJ3 140 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
SSRP1-202ENST00000293880 TRAPPC13A5PLN9 417 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 A8MXE2 369 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF43P17038 809 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 RRAS2P62070 204 aaPredicted RBP15.18■□□□□ 0.02
SSRP1-202ENST00000293880 EXOSC7Q15024 291 aaKnown RBP15.18■□□□□ 0.02
SSRP1-202ENST00000293880 TMEM41BQ5BJD5 291 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 PXDC1Q5TGL8 231 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 B3GLCTQ6Y288 498 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 IL22RA1Q8N6P7 574 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 OCSTAMPQ9BR26 566 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 SPATA6Q9NWH7 488 aaPredicted RBP15.18■□□□□ 0.02
SSRP1-202ENST00000293880 CNOT11Q9UKZ1 510 aaKnown RBP15.18■□□□□ 0.02
SSRP1-202ENST00000293880 GPR32O75388 356 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF585AQ6P3V2 769 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 LYPD4Q6UWN0 246 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF836Q6ZNA1 936 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 ISCA2Q86U28 154 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 MITD1Q8WV92 249 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 HHIPQ96QV1 700 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 SLCO3A1Q9UIG8 710 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 USP22Q9UPT9 525 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 MEIOCA2RUB1 952 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 STC2O76061 302 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 P04436 131 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 BCL7AQ4VC05 210 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 Q6ZPB1 254 aaPredicted RBP15.18■□□□□ 0.02
SSRP1-202ENST00000293880 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 HSD17B8Q92506 261 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 MRI1Q9BV20 369 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 A0A0B4J2A0 478 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 RAB27BO00194 218 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 SELENOWP63302 87 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 EGLN3Q9H6Z9 239 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 RNF186Q9NXI6 227 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 B4GALT7Q9UBV7 327 aa15.18■□□□□ 0.02
SSRP1-202ENST00000293880 SHPKQ9UHJ6 478 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms