RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 LILRB4Q8NHJ6 448 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ADAMTS15Q8TE58 950 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 VPS33AQ96AX1 596 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 JSRP1Q96MG2 331 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SLC38A1Q9H2H9 487 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OR51I1Q9H343 314 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SLC25A37Q9NYZ2 338 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 KLRF1Q9NZS2 232 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 B4GALT7Q9UBV7 327 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CHST2Q9Y4C5 530 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 KLF2Q9Y5W3 355 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 UQCRHLA0A096LP55 91 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 A0A0G2JNJ9 132 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 OR2M5A3KFT3 312 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MBD3L4A6NDZ8 208 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MBD3L3A6NE82 208 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MBD3L5A6NJ08 208 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 CD8B2A6NJW9 211 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 C19orf84I3L1E1 186 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 CFLARO15519 480 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 HCRTR2O43614 444 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 TRAPPC6AO75865 159 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 GSNP06396 782 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 TPOP07202 933 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 KRT16P08779 473 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 TFPTP0C1Z6 253 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 OR12D1P0DN82 309 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 GABRA1P14867 456 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 CD33P20138 364 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 CAPN3P20807 821 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 RPS4Y1P22090 263 aaKnown RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 DPP4P27487 766 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 TIMP3P35625 211 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 KRT20P35900 424 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MASP1P48740 699 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 STARP49675 285 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 SUCLG1P53597 346 aaKnown RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 CASP9P55211 416 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 PMPCAQ10713 525 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 GTDC1Q4AE62 458 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ACSF3Q4G176 576 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 SLC25A53Q5H9E4 307 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 NSUN5P2Q63ZY6 315 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 BHLHB9Q6PI77 547 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ARSKQ6UWY0 536 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 FRRS1Q6ZNA5 592 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MTERF4Q7Z6M4 381 aaKnown RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MIER2Q8N344 545 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 COX18Q8N8Q8 333 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MBD3L2Q8NHZ7 208 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 OIT3Q8WWZ8 545 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 RAB8BQ92930 207 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ABTB1Q969K4 478 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ARSGQ96EG1 525 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ADGRG7Q96K78 797 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ENKD1Q9H0I2 346 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 MED4Q9NPJ6 270 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 TAS2R10Q9NYW0 307 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 Q9UFV3 132 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 FAF1Q9UNN5 650 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-201ENST00000288344 RNF6Q9Y252 685 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF337Q9Y3M9 751 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 PCDHB14Q9Y5E9 798 aa8.28□□□□□ -1.08
HMGN1-201ENST00000288344 HRNRQ86YZ3 2850 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 DSPPQ9NZW4 1301 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 MPDZO75970 2070 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 NPIPA5A0A0B4J1W7 369 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 NPIPA7E9PJI5 369 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 H0YC42 278 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SCO2O43819 266 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 KIAA0513O60268 411 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 CHRM4P08173 479 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 NPIPA8P0DM63 369 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PTGER4P35408 488 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PGM1P36871 562 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 DCTP40126 519 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 MDH1P40925 334 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TPD52P55327 224 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PER3P56645 1201 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TXNL4AP83876 142 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GUCY1A3Q02108 690 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF117Q03924 483 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 CHRNEQ04844 493 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GANABQ14697 944 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GUSBP1Q15486 140 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TOMM34Q15785 309 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 CTU2Q2VPK5 515 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 C1orf185Q5T7R7 199 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 WLSQ5T9L3 541 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 RIPPLY2Q5TAB7 128 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 NXNQ6DKJ4 435 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TMEM211Q6ICI0 200 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF585AQ6P3V2 769 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SLC2A7Q6PXP3 512 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms