RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 MMEL1Q495T6 779 aa18■□□□□ 0.47
TIMP4-201ENST00000287814 COQ5Q5HYK3 327 aa18■□□□□ 0.47
TIMP4-201ENST00000287814 IFNEQ86WN2 208 aa18■□□□□ 0.47
TIMP4-201ENST00000287814 ABTB1Q969K4 478 aaPredicted RBP18■□□□□ 0.47
TIMP4-201ENST00000287814 TREX2Q9BQ50 279 aaPredicted RBP18■□□□□ 0.47
TIMP4-201ENST00000287814 THUMPD1Q9NXG2 353 aaKnown RBP18■□□□□ 0.47
TIMP4-201ENST00000287814 DSPPQ9NZW4 1301 aa18■□□□□ 0.47
TIMP4-201ENST00000287814 BBIP1A8MTZ0 92 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 EVPLLA8MZ36 301 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 ZNF264O43296 627 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 AGFG2O95081 481 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 RPS4Y1P22090 263 aaKnown RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 CASP6P55212 293 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 GANABQ14697 944 aaKnown RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 TMEM44Q2T9K0 475 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 NANOGP8Q6NSW7 305 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 ZNF585AQ6P3V2 769 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 RP9Q8TA86 221 aaKnown RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 LRRC58Q96CX6 371 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 RCN3Q96D15 328 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 WDYHV1Q96HA8 205 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 SFXN2Q96NB2 322 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 THUMPD3Q9BV44 507 aaKnown RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 NANOGQ9H9S0 305 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 MED17Q9NVC6 651 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 MEMO1Q9Y316 297 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 CSTAP01040 98 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 LDLRP01130 860 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 ARAFP10398 606 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 UBL4AP11441 157 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 COX4I1P13073 169 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 PGM1P36871 562 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 P2RX1P51575 399 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 CRISP3P54108 245 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 KCNJ10P78508 379 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 SKP2Q13309 424 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 TOMM34Q15785 309 aaPredicted RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 GCNT6Q5T4J0 391 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 WLSQ5T9L3 541 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 RSPO3Q9BXY4 272 aaPredicted RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 ALKBH4Q9NXW9 302 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 SUCOQ9UBS9 1254 aaKnown RBP17.99■□□□□ 0.47
TIMP4-201ENST00000287814 ARL2BPQ9Y2Y0 163 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 MYO7BQ6PIF6 2116 aa17.99■□□□□ 0.47
TIMP4-201ENST00000287814 OR2M5A3KFT3 312 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 WIPF3A6NGB9 483 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 EIF4E2O60573 245 aaKnown RBP17.98■□□□□ 0.47
TIMP4-201ENST00000287814 ACTL6AO96019 429 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 UBTFL6P0CB48 400 aaPredicted RBP17.98■□□□□ 0.47
TIMP4-201ENST00000287814 LHX2P50458 406 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 PLPPR5Q32ZL2 321 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 RABL3Q5HYI8 236 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 RAET1LQ5VY80 246 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 RTL6Q6ICC9 239 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 EIF3MQ7L2H7 374 aaKnown RBP17.98■□□□□ 0.47
TIMP4-201ENST00000287814 VRK2Q86Y07 508 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 PTOV1Q86YD1 416 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 MARVELD2Q8N4S9 558 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 FAM71CQ8NEG0 241 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 NFKBIDQ8NI38 313 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 GPR119Q8TDV5 335 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 OIT3Q8WWZ8 545 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 CCDC120Q96HB5 630 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 DMRTA2Q96SC8 542 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 PRDM14Q9GZV8 571 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 LAT2Q9GZY6 243 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 KAT8Q9H7Z6 458 aaKnown RBP17.98■□□□□ 0.47
TIMP4-201ENST00000287814 HHATLQ9HCP6 504 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 CALML5Q9NZT1 146 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 CORO2BQ9UQ03 480 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 ZNF337Q9Y3M9 751 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 FAM215AQ9Y5M1 114 aa17.98■□□□□ 0.47
TIMP4-201ENST00000287814 A0A0G2JPF8 293 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 KDM4EB2RXH2 506 aaPredicted RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 HNRNPCL2B2RXH8 293 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 HNRNPCL3B7ZW38 293 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 HNRNPCL1O60812 293 aaKnown RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 ADAM11O75078 769 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 CYP7B1O75881 506 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 PGM3O95394 542 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 LINGO3P0C6S8 592 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 HNRNPCL4P0DMR1 293 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 CHMP24386 653 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 GLYR1Q49A26 553 aaPredicted RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 OR5W2Q8NH69 310 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 POC1BQ8TC44 478 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 CNOT9Q92600 299 aaKnown RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 PMM1Q92871 262 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 DTNBP1Q96EV8 351 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 TP63Q9H3D4 680 aaPredicted RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 TMEM38AQ9H6F2 299 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 BCL2L10Q9HD36 194 aa17.97■□□□□ 0.47
TIMP4-201ENST00000287814 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.97■□□□□ 0.47
TIMP4-201ENST00000287814 BAHCC1Q9P281 2608 aa17.96■□□□□ 0.47
TIMP4-201ENST00000287814 E9PLN8 166 aa17.96■□□□□ 0.47
TIMP4-201ENST00000287814 ZG16O60844 167 aa17.96■□□□□ 0.47
TIMP4-201ENST00000287814 IL7RP16871 459 aa17.96■□□□□ 0.47
TIMP4-201ENST00000287814 PSMA4P25789 261 aaKnown RBP17.96■□□□□ 0.47
TIMP4-201ENST00000287814 GZMMP51124 257 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms