RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 FCRL1Q96LA6 429 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 FKBP7Q9Y680 259 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 LCMT2O60294 686 aaKnown RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 HOXB2P14652 356 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF250P15622 560 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 HCCSP53701 268 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 DGCR2P98153 550 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PITPNAQ00169 270 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ZC3H14Q6PJT7 736 aaKnown RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF527Q8NB42 609 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 OR4E2Q8NGC2 313 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ZBP1Q9H171 429 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 IKZF2Q9UKS7 526 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 BAIAP2Q9UQB8 552 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 GPR55Q9Y2T6 319 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 UBE2QL1A1L167 161 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 UNC119BA6NIH7 251 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 SEMA7AO75326 666 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PKLRP30613 574 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 BMP8BP34820 402 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 OR12D2P58182 307 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PSMA6P60900 246 aaKnown RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PDE7AQ13946 482 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PYHIN1Q6K0P9 492 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 BMP8AQ7Z5Y6 402 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 SLITRK4Q8IW52 837 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ACOT4Q8N9L9 421 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 A0A1W2PS29 197 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 EMC8O43402 210 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 TRIM3O75382 744 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 LGI1O95970 557 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 CXCL10P02778 98 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 STAT5AP42229 794 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 SHHQ15465 462 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 DPPA4Q7L190 304 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 OR4K13Q8NH42 304 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 CDS1Q92903 461 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 C1QTNF6Q9BXI9 259 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 TMEM27Q9HBJ8 222 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 CASP8AP2Q9UKL3 1982 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 EDDM13A0A1B0GTR0 161 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 A0A1W2PP55 124 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 IGLON5A6NGN9 336 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 ARPC1BO15143 372 aaKnown RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PPP1R3DO95685 299 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 MMP12P39900 470 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 FNTBP49356 437 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 DEFB134Q4QY38 66 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 C1orf94Q6P1W5 598 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-201ENST00000286835 LCTLQ6UWM7 567 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 SIRT6Q8N6T7 355 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 SGPP1Q9BX95 441 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 PINK1Q9BXM7 581 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 DPEP2Q9H4A9 486 aa12.51□□□□□ -0.41
SCAF4-201ENST00000286835 TRBV2A0A0J9YWF9 115 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 ARRDC5A6NEK1 342 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 IFNGP01579 166 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF3P17036 446 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 CXCL3P19876 107 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
SCAF4-201ENST00000286835 GBX2P52951 348 aaPredicted RBP12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SLC25A35Q3KQZ1 300 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 GPR155Q7Z3F1 870 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 HDDC2Q7Z4H3 204 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 OAFQ86UD1 273 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 ZSWIM3Q96MP5 696 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 KCND3Q9UK17 655 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 B8ZZF3 427 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 TFP02787 698 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 BSGP35613 385 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 RUNX3Q13761 415 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 TMEM201Q5SNT2 666 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 ZBTB37Q5TC79 503 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 PLA2G15Q8NCC3 412 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 OR5M3Q8NGP4 307 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 OR4Q3Q8NH05 313 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SLC23A2Q9UGH3 650 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 KCNN3Q9UGI6 736 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SCN10AQ9Y5Y9 1956 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 LIMS1P48059 325 aa12.5□□□□□ -0.41
SCAF4-201ENST00000286835 SLC7A9P82251 487 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms