RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 A0A0G2JMP0 313 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 KDM4EB2RXH2 506 aaPredicted RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 UBFD1O14562 309 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 ARHGEF15O94989 841 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 CHRM4P08173 479 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 ALDOCP09972 364 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 RAC2P15153 192 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 RPS5P46782 204 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 CAMLGP49069 296 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 ARG2P78540 354 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 OR4M2Q8NGB6 313 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 C4orf36Q96KX1 117 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 OR7D2Q96RA2 312 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 C20orf27Q9GZN8 174 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 FOLH1BQ9HBA9 442 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 TBCCD1Q9NVR7 557 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 CCL26Q9Y258 94 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 WDR37Q9Y2I8 494 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 LOC105369274A0A096LPK9 316 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 PENKP01210 267 aaPredicted RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 C1SP09871 688 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 MSL3P1P0C860 447 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 HOXD9P28356 352 aaPredicted RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 GLO1Q04760 184 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 CHRNEQ04844 493 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 EEF1A2Q05639 463 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 SMN1Q16637 294 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 ENTPD8Q5MY95 495 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 NCCRP1Q6ZVX7 275 aaPredicted RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 OR4N4Q8N0Y3 316 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 ASB11Q8WXH4 323 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 LRRC46Q96FV0 321 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 C16orf58Q96GQ5 468 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 SLC22A12Q96S37 553 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 SYT11Q9BT88 431 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 SPDEFO95238 335 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 DCNP07585 359 aaKnown RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 GABRR1P24046 479 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CRABP1P29762 137 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ZP2Q05996 745 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ACSM3Q53FZ2 586 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 SERPINA11Q86U17 422 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 HORMAD2Q8N7B1 307 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GPR148Q8TDV2 347 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 OR52D1Q9H346 318 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CSNK1G1Q9HCP0 422 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 MEPEQ9NQ76 525 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 TEX10Q9NXF1 929 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 WASH4PA8MWX3 477 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 SLC22A5O76082 557 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 F13BP05160 661 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CHMP24386 653 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GPR50Q13585 617 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 B3GLCTQ6Y288 498 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 MEX3BQ6ZN04 569 aaKnown RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 SLC2A12Q8TD20 617 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ISG20Q96AZ6 181 aaKnown RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 INSM2Q96T92 566 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 GMPR2Q9P2T1 348 aaKnown RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 ADAM18Q9Y3Q7 739 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GJE1A6NN92 205 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 RAB3DO95716 219 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ATXN1LP0C7T5 689 aaKnown RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ABHD12BQ7Z5M8 362 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 SPARTQ8N0X7 666 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CPXM2Q8N436 756 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 OR4F15Q8NGB8 312 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GPN2Q9H9Y4 310 aaPredicted RBP10.76□□□□□ -0.69
USP53-201ENST00000274030 TRBV11-1A0A0K0K1C0 115 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 RFXAPO00287 272 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 TACR1P25103 407 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GDF1P27539 372 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 GCAP28676 217 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CXCL12P48061 93 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 PSPHP78330 225 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 RAB41Q5JT25 222 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 FAM78AQ5JUQ0 283 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 KRBOX4Q5JUW0 171 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 KIAA1211LQ6NV74 962 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CCDC32Q9BV29 185 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 LHX3Q9UBR4 397 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 ZBTB42B2RXF5 422 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 EPHA4P54764 986 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 IL20RBQ6UXL0 311 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 PXKQ7Z7A4 578 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 CNEP1R1Q8N9A8 125 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 LKAAEAR1Q8TD35 194 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 PRRC1Q96M27 445 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 NELFAQ9H3P2 528 aa10.76□□□□□ -0.69
USP53-201ENST00000274030 TAS2R8Q9NYW2 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms