RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
LIG1-201ENST00000263274 PMM1Q92871 262 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 IER2Q9BTL4 223 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 ACTRT3Q9BYD9 372 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 SLC6A17Q9H1V8 727 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 PPP1R3EQ9H7J1 279 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 PRSS16Q9NQE7 514 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 PRDM7Q9NQW5 492 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 NLGN3Q9NZ94 848 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 CALML5Q9NZT1 146 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 FBXL4Q9UKA2 621 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 PCDHGB7Q9Y5F8 929 aa11.79□□□□□ -0.52
LIG1-201ENST00000263274 FAM86C2PA6NEL3 165 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 SSNA1O43805 119 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR5F1O95221 314 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 POLR2CP19387 275 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 CMPK1P30085 196 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ACSL1P33121 698 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 ABATP80404 500 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 E2F1Q01094 437 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 IRF4Q15306 451 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TTLQ8NG68 377 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR7G2Q8NG99 324 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR5W2Q8NH69 310 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF431Q8TF32 576 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 DIO2Q92813 273 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 BCL2L10Q9HD36 194 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TRIM36Q9NQ86 728 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ACSL5Q9ULC5 683 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 CBLCQ9ULV8 474 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ASB4Q9Y574 426 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 INSL6Q9Y581 213 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 FCER2P06734 321 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TBXA2RP21731 343 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TEAD1P28347 426 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 STAT5AP42229 794 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR12D2P58182 307 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF155Q12901 538 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 STK11Q15831 433 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 SLC48A1Q6P1K1 146 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 LUZP2Q86TE4 346 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 TRMT10AQ8TBZ6 339 aaKnown RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 ORAI1Q96D31 301 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 C4orf36Q96KX1 117 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 FUZQ9BT04 418 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 SLC6A20Q9NP91 592 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 BRD7Q9NPI1 651 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 ING4Q9UNL4 249 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 UNC119BA6NIH7 251 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 I3L521 148 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 FGF19O95750 216 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 F3P13726 295 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 SSTR2P30874 369 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF267Q14586 743 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 BICRALQ6AI39 1079 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 ZNF620Q6ZNG0 422 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 COX18Q8N8Q8 333 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 OR4C6Q8NH72 309 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 CHIAQ9BZP6 476 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
LIG1-201ENST00000263274 C20orf141Q9NUB4 165 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 FBXO34Q9NWN3 711 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 MGAT4AQ9UM21 535 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 CA5BQ9Y2D0 317 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
LIG1-201ENST00000263274 KDM4EB2RXH2 506 aaPredicted RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 SNRPBP14678 240 aaKnown RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 GIFP27352 417 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 PKLRP30613 574 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 FGF9P31371 208 aaPredicted RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 GAS1P54826 345 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 TP53I3Q53FA7 332 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 TMEM35AQ53FP2 167 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 KIAA1211LQ6NV74 962 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 PRSS45Q7RTY3 260 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 NRROSQ86YC3 692 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 FAM98AQ8NCA5 519 aaKnown RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 LSM14AQ8ND56 463 aaKnown RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 SRFBP1Q8NEF9 429 aaKnown RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 OR2L3Q8NG85 312 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
LIG1-201ENST00000263274 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
LIG1-201ENST00000263274 RNF170Q96K19 258 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms