RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF443Q9Y2A4 671 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 KIF26AQ9ULI4 1882 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3DA0A087WVF3 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3IA0A087WXS9 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3EA0A087X179 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3KA0A087X1G2 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3FA6NER0 549 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3LB9A6J9 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ORC5O43913 435 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 GMFGO60234 142 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TIMP1P01033 207 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3HP0C7X1 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PTHLHP12272 177 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 DDX6P26196 483 aaKnown RBP eCLIP8.49□□□□□ -1.05
MSH4-201ENST00000263187 GZMKP49863 264 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ADAM15Q13444 863 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ARHGAP19Q14CB8 494 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 GAB4Q2WGN9 574 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 OTPQ5XKR4 325 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3GQ6DHY5 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TANGO2Q6ICL3 276 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3CQ6IPX1 549 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 SSX6Q7RTT6 188 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 SERPINA12Q8IW75 414 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D3Q8IZP1 549 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 OR7G1Q8NGA0 311 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 OR5W2Q8NH69 310 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TSACCQ96A04 125 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 TEX12Q9BXU0 123 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PCBD2Q9H0N5 130 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 BCL2L10Q9HD36 194 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 CD93Q9NPY3 652 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TAS2R7Q9NYW3 318 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 A0A1W2PQ72 361 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CDC123O75794 336 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 ALX3O95076 343 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PPP1R3DO95685 299 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 BMP7P18075 431 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CXCL3P19876 107 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 GIFP27352 417 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 HTR2AP28223 471 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 TALDO1P37837 337 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 FXYD6P3P58550 94 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 GNG2P59768 71 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RRAS2P62070 204 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 RPA4Q13156 261 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 HYAL4Q2M3T9 481 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 TMEM52BQ4KMG9 183 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 AGBL4Q5VU57 503 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 SDE2Q6IQ49 451 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 KIAA1211LQ6NV74 962 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MZT2AQ6P582 158 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ADAMTSL4Q6UY14 1074 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RFPL4BQ6ZWI9 263 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZAR1Q86SH2 424 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 POGLUT1Q8NBL1 392 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 OR5J2Q8NH18 312 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 FGF13Q92913 245 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZMYND19Q96E35 227 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 ACTRT3Q9BYD9 372 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 BABAM2Q9NXR7 383 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 TBC1D29Q9UFV1 150 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PRKAG2Q9UGJ0 569 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CES1P1Q9UKY3 287 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZNF346Q9UL40 294 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 MRPS2Q9Y399 296 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 TP53BP1Q12888 1972 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 A0A087WV48 116 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 A0A1W2PQU0 124 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 SLC9B1P1A6NJY1 282 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 CHST10O43529 356 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RFPL3O75679 317 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MT-ND4P03905 459 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ERGP11308 486 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 NT5EP21589 574 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 HTR1FP30939 366 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 FGF9P31371 208 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 PSMB10P40306 273 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CST6Q15828 149 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MRPL2Q5T653 305 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 ANKRD54Q6NXT1 300 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MBOAT2Q6ZWT7 520 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZNF765Q7L2R6 523 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PEX5LQ8IYB4 626 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 TRMT10AQ8TBZ6 339 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 WFIKKN2Q8TEU8 576 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 DNAJA4Q8WW22 397 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 PATE1Q8WXA2 126 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PTP4A1Q93096 173 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 PEX11GQ96HA9 241 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 TOX2Q96NM4 488 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CACYBPQ9HB71 228 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 FGF22Q9HCT0 170 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 SIDT1Q9NXL6 827 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms