RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SMAD5Q99717 465 aaKnown RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 NPAS1Q99742 590 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 OR10A4Q9H209 315 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 FBXL2Q9UKC9 423 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 SLC13A4Q9UKG4 626 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 CAMK2AQ9UQM7 478 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 HS3ST2Q9Y278 367 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 MCRIP1C9JLW8 97 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 TEX46H3BTG2 121 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 MID1O15344 667 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 GSTZ1O43708 216 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 TBX19O60806 448 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 ADAMTS4O75173 837 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 GIPP09681 153 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 CTSAP10619 480 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 SNRPBP14678 240 aaKnown RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 RAB3BP20337 219 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 ATP5A1P25705 553 aaKnown RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 GDNFP39905 211 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 CCR8P51685 355 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 ST3GAL3Q11203 375 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 HLXQ14774 488 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 TRAM1Q15629 374 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 C17orf107Q6ZR85 190 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 ESPNLQ6ZVH7 1005 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 HSD17B13Q7Z5P4 300 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 TMEM150AQ86TG1 271 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 SPICQ8N5J4 248 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 CLRN3Q8NCR9 226 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 ABHD4Q8TB40 342 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 CNOT9Q92600 299 aaKnown RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 PIGKQ92643 395 aa13.96□□□□□ -0.17
XRCC1-201ENST00000262887 TRMT2BQ96GJ1 504 aaKnown RBP13.96□□□□□ -0.17
XRCC1-201ENST00000262887 A0A1B0GUH1 482 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 DAPL1A0PJW8 107 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 ZC3H12DA2A288 527 aaKnown RBP13.96□□□□□ -0.18
XRCC1-201ENST00000262887 SULT1B1O43704 296 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 RP2O75695 350 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 PSMB1P20618 241 aaKnown RBP13.96□□□□□ -0.18
XRCC1-201ENST00000262887 AHRP35869 848 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 STAT5AP42229 794 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 KHKP50053 298 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 HTR4Q13639 388 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 PRAMEF14Q5SWL7 426 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 FAM69AQ5T7M9 428 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 PRAMEF13Q5VWM6 474 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 TMEM99Q8N816 258 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 OR2T33Q8NG76 320 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 INTS12Q96CB8 462 aaKnown RBP13.96□□□□□ -0.18
XRCC1-201ENST00000262887 TIMP4Q99727 224 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 IFT27Q9BW83 186 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 PINK1Q9BXM7 581 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 AUNIPQ9H7T9 357 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 BCL2L10Q9HD36 194 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 TEX10Q9NXF1 929 aaPredicted RBP13.96□□□□□ -0.18
XRCC1-201ENST00000262887 MRPL15Q9P015 296 aaKnown RBP13.96□□□□□ -0.18
XRCC1-201ENST00000262887 NPFFR2Q9Y5X5 522 aa13.96□□□□□ -0.18
XRCC1-201ENST00000262887 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 A0A0B4J203 849 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 HYAL3O43820 417 aaPredicted RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 TBX6O95947 436 aaPredicted RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 PLATP00750 562 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 FGBP02675 491 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 FPR3P25089 353 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 BSGP35613 385 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 MAZP56270 477 aaKnown RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 B3GNTL1Q67FW5 361 aaPredicted RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 PLBD1Q6P4A8 553 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 ATRAIDQ6UW56 229 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 BAIAP2L2Q6UXY1 529 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 FAM98AQ8NCA5 519 aaKnown RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 OR4D9Q8NGE8 314 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 SMIM4Q8WVI0 70 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 CA10Q9NS85 328 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 ANXA2P2A6NMY6 339 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 E9PI62 339 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 SUSD5O60279 629 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 APOC3P02656 99 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 ALPPL2P10696 532 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 CD53P19397 219 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 CALCRP30988 508 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 S100A11P31949 105 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 GCGRP47871 477 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 RAP2BP61225 183 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 FUT5Q11128 374 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 TAF1CQ15572 869 aaPredicted RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 FIP1L1Q6UN15 594 aaKnown RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF620Q6ZNG0 422 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 TRMT11Q7Z4G4 463 aaKnown RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 GID4Q8IVV7 300 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 GJD3Q8N144 294 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 OR10H4Q8NGA5 316 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 ZFPM2Q8WW38 1151 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 DIO2Q92813 273 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 IL17FQ96PD4 163 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 TMPRSS13Q9BYE2 586 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 MTG2Q9H4K7 406 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 NANSQ9NR45 359 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms