RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCL11P51671 97 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 GNA13Q14344 377 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 CRB2Q5IJ48 1285 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 ACER2Q5QJU3 275 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 UNQ6494/PRO21346Q6UXR6 183 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 LSRQ86X29 649 aaPredicted RBP25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 GRAMD2AQ8IUY3 354 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 CHERPQ8IWX8 916 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 ANGPTL6Q8NI99 470 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 LHPPQ9H008 270 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 SAP130Q9H0E3 1048 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 PNPLA3Q9NST1 481 aa25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 DCAF13Q9NV06 445 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-201ENST00000262188 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 PDZK1Q5T2W1 519 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 SLX4IPQ5VYV7 408 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 IL20RBQ6UXL0 311 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 WFDC6Q9BQY6 131 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 G6PC3Q9BUM1 346 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 RLIMQ9NVW2 624 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 FKBP14Q9NWM8 211 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 CALML5Q9NZT1 146 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 RRP8O43159 456 aaKnown RBP25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 ABCB7O75027 752 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 BCAS1O75363 584 aaPredicted RBP25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 PRKD3O94806 890 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 UTS2O95399 124 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 KRT20P35900 424 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 DCTP40126 519 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 APOOLQ6UXV4 268 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 LINC00696Q6ZRV3 163 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 ARMC8Q8IUR7 673 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 SLC30A8Q8IWU4 369 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 BEST3Q8N1M1 668 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 GATSQ8NAP1 163 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 GOLM1Q8NBJ4 401 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 GPR32P1Q8NGA4 272 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 SUN5Q8TC36 379 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 SLC22A8Q8TCC7 542 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 C12orf43Q96C57 262 aaKnown RBP25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 RTN4RQ9BZR6 473 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 MUC13Q9H3R2 512 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 MTHFD2LQ9H903 347 aaPredicted RBP25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 SEC14L3Q9UDX4 400 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 CHST2Q9Y4C5 530 aa25.24■■□□□ 1.63
SMARCD3-201ENST00000262188 EXPH5Q8NEV8 1989 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 PPM1BO75688 479 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 STAMBPO95630 424 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 CTAG1AP78358 180 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 BICRALQ6AI39 1079 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 PPP4R4Q6NUP7 873 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 OR10G3Q8NGC4 313 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 OR52P1PQ8NH57 321 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 ZNF607Q96SK3 696 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 SEPHS2Q99611 448 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 ARMC1Q9NVT9 282 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 GPR83Q9NYM4 423 aa25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 YARS2Q9Y2Z4 477 aaKnown RBP25.23■■□□□ 1.63
SMARCD3-201ENST00000262188 A0A087WXM4 84 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 SOX30O94993 753 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 EPPINO95925 133 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 RRADP55042 308 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 PRAMEF8Q5VWM4 474 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 PRAMEF7Q5VXH5 474 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 NODALQ96S42 347 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 KCNMB2Q9Y691 235 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 AGAP5A6NIR3 686 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 NPIPB9F8W1W9 429 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 MT-ND1P03886 318 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 M6PRP20645 277 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 CD247P20963 164 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 SSR4P51571 173 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 CRTC2Q53ET0 693 aaPredicted RBP25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 ZNF311Q5JNZ3 666 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 CBLL1Q75N03 491 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 KRT73Q86Y46 540 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 ASB15Q8WXK1 588 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 STMN3Q9NZ72 180 aa25.22■■□□□ 1.63
SMARCD3-201ENST00000262188 NDUFAF6Q330K2 333 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 ARMC10Q8N2F6 343 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 CLIP4Q8N3C7 705 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 CANT1Q8WVQ1 401 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 SPACA9Q96E40 222 aaPredicted RBP25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 HSH2DQ96JZ2 352 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 OSBPL11Q9BXB4 747 aa25.21■■□□□ 1.63
SMARCD3-201ENST00000262188 FRS3O43559 492 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 FBXO45P0C2W1 286 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 IL7RP16871 459 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 TCEA1P23193 301 aaKnown RBP25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 DCKP27707 260 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 OR1E2P47887 323 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 PLAURQ03405 335 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 JMJD6Q6NYC1 403 aaPredicted RBP25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 ZNF836Q6ZNA1 936 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 LINC00299Q6ZSB3 139 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 TMEM156Q8N614 296 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 SPPL2AQ8TCT8 520 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 TRIM15Q9C019 465 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 PLA2G3Q9NZ20 509 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 MRTO4Q9UKD2 239 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms