RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 MKKSQ9NPJ1 570 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 ENPP5Q9UJA9 477 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 CFL2Q9Y281 166 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 IGHV5-10-1A0A0J9YXX1 117 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 TCRBV16S1A1N1A0A5B0 115 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 NTN1O95631 604 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 SLC15A1P46059 708 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 PCYT1AP49585 367 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 ST13P50502 369 aaKnown RBP25.54■■□□□ 1.68
CCM2-201ENST00000258781 SLC37A1P57057 533 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 IQCF1Q8N6M8 205 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 POGLUT1Q8NBL1 392 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 DNAJB12Q9NXW2 375 aaKnown RBP25.54■■□□□ 1.68
CCM2-201ENST00000258781 SEC16AO15027 2179 aa25.54■■□□□ 1.68
CCM2-201ENST00000258781 ENTPD6O75354 484 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 CCNA2P20248 432 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 C21orf33P30042 268 aaPredicted RBP25.53■■□□□ 1.68
CCM2-201ENST00000258781 ST3GAL4Q11206 333 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 MEX3DQ86XN8 651 aaKnown RBP25.53■■□□□ 1.68
CCM2-201ENST00000258781 FAM26EQ8N5C1 309 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 ZNF614Q8N883 585 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 OIT3Q8WWZ8 545 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 PLA2G12AQ9BZM1 189 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 EGLN3Q9H6Z9 239 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 TMEM27Q9HBJ8 222 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 PARD6AQ9NPB6 346 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 TVP23BQ9NYZ1 205 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 COL27A1Q8IZC6 1860 aaPredicted RBP25.53■■□□□ 1.68
CCM2-201ENST00000258781 SYNDIG1LA6NDD5 238 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 AGRPO00253 132 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 STSP08842 583 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 ATXN8OSP0DMR3 200 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 PSMB9P28065 219 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 RNF144AP50876 292 aaPredicted RBP25.53■■□□□ 1.68
CCM2-201ENST00000258781 C1orf189Q5VU69 101 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 RHBDD2Q6NTF9 364 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 SLC27A4Q6P1M0 643 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 SLC16A12Q6ZSM3 486 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 CLDN22Q8N7P3 220 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 TCEANCQ8N8B7 351 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 C9orf43Q8TAL5 461 aaPredicted RBP25.53■■□□□ 1.68
CCM2-201ENST00000258781 OSTF1Q92882 214 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 YIPF6Q96EC8 236 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 DSN1Q9H410 356 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 CLCA3PQ9Y6N3 262 aa25.53■■□□□ 1.68
CCM2-201ENST00000258781 PIP5K1CO60331 668 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 IGKV3-11P04433 115 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 RORAP35398 523 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 PPICP45877 212 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 IRF3Q14653 427 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 NNATQ16517 81 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 MEDAGQ5VYS4 303 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 ACSM5Q6NUN0 579 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 ZSCAN1Q8NBB4 408 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 CCDC74BQ96LY2 380 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 PRRG3Q9BZD7 231 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 SELENONQ9NZV5 590 aa25.52■■□□□ 1.68
CCM2-201ENST00000258781 ZNF223Q9UK11 482 aaPredicted RBP25.52■■□□□ 1.68
CCM2-201ENST00000258781 NTN3O00634 580 aaPredicted RBP25.51■■□□□ 1.67
CCM2-201ENST00000258781 POLR1CO15160 346 aaPredicted RBP25.51■■□□□ 1.67
CCM2-201ENST00000258781 MAN1A2O60476 641 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 ACP1P24666 158 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 GPR4P46093 362 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 EFNB1P98172 346 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 ZNF550Q7Z398 422 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 OR8D4Q8NGM9 314 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 TMEM239Q8WW34 195 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 ART5Q96L15 291 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 GFM1Q96RP9 751 aaKnown RBP25.51■■□□□ 1.67
CCM2-201ENST00000258781 CDCA4Q9BXL8 241 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 TRIM2Q9C040 744 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 D6RAR5 112 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 DDAH2O95865 285 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 VWA2Q5GFL6 755 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 WDR88Q6ZMY6 472 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 OR14A16Q8NHC5 309 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 SLC2A12Q8TD20 617 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 PRRX2Q99811 253 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 TMEM9BQ9NQ34 198 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 IL20Q9NYY1 176 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 DNAJC27Q9NZQ0 273 aa25.51■■□□□ 1.67
CCM2-201ENST00000258781 RPL36Q9Y3U8 105 aaKnown RBP25.51■■□□□ 1.67
CCM2-201ENST00000258781 A8MUA0 341 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 PRKYO43930 277 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 LCKP06239 509 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 ACAA2P42765 397 aaKnown RBP25.5■■□□□ 1.67
CCM2-201ENST00000258781 ZNF620Q6ZNG0 422 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 NAXDQ8IW45 347 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 SLITRK4Q8IW52 837 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 ZNF721Q8TF20 911 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 CRELD1Q96HD1 420 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 HS6ST2Q96MM7 605 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 OR8D2Q9GZM6 311 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 CDH10Q9Y6N8 788 aa25.5■■□□□ 1.67
CCM2-201ENST00000258781 A0A0B4J2E0 115 aa25.49■■□□□ 1.67
CCM2-201ENST00000258781 A0A1B0GX12 115 aa25.49■■□□□ 1.67
CCM2-201ENST00000258781 A0A1W2PPW3 197 aa25.49■■□□□ 1.67
CCM2-201ENST00000258781 GABARAPO95166 117 aa25.49■■□□□ 1.67
CCM2-201ENST00000258781 EFNA3P52797 238 aa25.49■■□□□ 1.67
CCM2-201ENST00000258781 NFATC3Q12968 1075 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms