RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 AMZ1Q400G9 498 aa12.15□□□□□ -0.47
THSD1-201ENST00000258613 PLBD1Q6P4A8 553 aa12.15□□□□□ -0.47
THSD1-201ENST00000258613 RBM18Q96H35 190 aaKnown RBP12.15□□□□□ -0.47
THSD1-201ENST00000258613 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.47
THSD1-201ENST00000258613 SMAD5Q99717 465 aaKnown RBP12.15□□□□□ -0.47
THSD1-201ENST00000258613 ERVK13-1Q9NX77 482 aa12.15□□□□□ -0.47
THSD1-201ENST00000258613 LRIT1Q9P2V4 623 aa12.15□□□□□ -0.47
THSD1-201ENST00000258613 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 SRFP11831 508 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 SLC16A1P53985 500 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 CDH11P55287 796 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 POU6F2P78424 691 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 TEKQ02763 1124 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 RPL6Q02878 288 aaKnown RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 TDGQ13569 410 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ZNF620Q6ZNG0 422 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 RASSF6Q6ZTQ3 369 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 CADM2Q8N3J6 435 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ARHGEF39Q8N4T4 335 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 CDRT4Q8N9R6 151 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 RIT1Q92963 219 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 CTHRC1Q96CG8 243 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 BCL7BQ9BQE9 202 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 UBE2ZQ9H832 354 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 FLRT3Q9NZU0 649 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 FAM47E-STBD1D6RA91 191 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 SSX4O60224 188 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 IFNA16P05015 189 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 NGFRP08138 427 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 LIMS3P0CW19 117 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 LIMS4P0CW20 117 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 PIPP12273 146 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 NID1P14543 1247 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ZNF12P17014 697 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ALAS2P22557 587 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 AZGP1P25311 298 aaKnown RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 CD38P28907 300 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 DECR1Q16698 335 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 PRAMEF8Q5VWM4 474 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 PRAMEF7Q5VXH5 474 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 GATAD2AQ86YP4 633 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ZNF655Q8N720 491 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 RCBTB1Q8NDN9 531 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 C9orf43Q8TAL5 461 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 KLHDC3Q9BQ90 382 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 WDR12Q9GZL7 423 aaKnown RBP12.14□□□□□ -0.47
THSD1-201ENST00000258613 NUAK2Q9H093 628 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 ERVK-19Q9WJR5 959 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
THSD1-201ENST00000258613 TNFRSF10AO00220 468 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 SURF4O15260 269 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 REM1O75628 298 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 PROS1P07225 676 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 MRPL3P09001 348 aaKnown RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 SAGP10523 405 aaPredicted RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 GSTM3P21266 225 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 BCKDHBP21953 392 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 ATP6V1E1P36543 226 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 SLC9A3P48764 834 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 RAB38P57729 211 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 C19orf48Q6RUI8 117 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 OR51G2Q8NGK0 314 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 OR4C3Q8NH37 302 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 C1GALT1C1Q96EU7 318 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 IL20Q9NYY1 176 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 KLK4Q9Y5K2 254 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 OR5K4A6NMS3 321 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 PRODHO43272 600 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 KLF4O43474 513 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 BRINP1O60477 761 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 RAB36O95755 333 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 IL9P15248 144 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 NOS3P29474 1203 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 UGT2B10P36537 528 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 BCAP31P51572 246 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 NDUFA9Q16795 377 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 SLC36A4Q6YBV0 504 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 UTS2BQ765I0 119 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 SIRT6Q8N6T7 355 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 TMEM239Q8WW34 195 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 TP53INP1Q96A56 240 aa12.13□□□□□ -0.47
THSD1-201ENST00000258613 EFHD2Q96C19 240 aaPredicted RBP12.13□□□□□ -0.47
THSD1-201ENST00000258613 MMP27Q9H306 513 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms