RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PPICP45877 212 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 RORCP51449 518 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TFF2Q03403 129 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 OR7A5Q15622 319 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TMEM207Q6UWW9 146 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 GLIS1Q8NBF1 620 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 NKD1Q969G9 470 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC45A3Q96JT2 553 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 IL4I1Q96RQ9 567 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 ADOQ96SZ5 270 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF160Q9HCG1 818 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 DUSP22Q9NRW4 184 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 DNAJB11Q9UBS4 358 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 H7C1Q1 480 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 P2RX1P51575 399 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 OR12D2P58182 307 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TMEM244Q5VVB8 128 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 NANOGP8Q6NSW7 305 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 C1orf87Q8N0U7 546 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 OR7D2Q96RA2 312 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 CLCA1A8K7I4 914 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 H0YAE9 185 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 UTS2O95399 124 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 PRKACBP22694 351 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 CHMP24386 653 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 M1APQ8TC57 530 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 CTRCQ99895 268 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 DHCR7Q9UBM7 475 aaKnown RBP12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 REV1Q9UBZ9 1251 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TP53P04637 393 aaPredicted RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 SERPINA7P05543 415 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RAC2P15153 192 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 POU3F3P20264 500 aaPredicted RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 SFTPDP35247 375 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 UGT2B10P36537 528 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RHDQ02161 417 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 OR8J2Q8NGG1 315 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 KCNA7Q96RP8 456 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ACTL7AQ9Y615 435 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ERV3-1Q14264 604 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ERMP1Q7Z2K6 904 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 LRRC17Q8N6Y2 441 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ATOH8Q96SQ7 321 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC6A17Q9H1V8 727 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 MEN1O00255 615 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 HSD17B1P14061 328 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC19A1P41440 591 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 GCGRP47871 477 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 FZD2Q14332 565 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RAB11BQ15907 218 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CRTC2Q53ET0 693 aaPredicted RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CBR4Q8N4T8 237 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 C22orf15Q8WYQ4 148 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 APIPQ96GX9 242 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 OR52A5Q9H2C5 316 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 PPT2Q9UMR5 302 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 D6RAR5 112 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CBR3O75828 277 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CKMT1AP12532 417 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 NELFEP18615 380 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ECHS1P30084 290 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 GINS1Q14691 196 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CLEC12AQ5QGZ9 265 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 WFDC5Q8TCV5 224 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 CUEDC1Q9NWM3 386 aaPredicted RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 KCNG2Q9UJ96 466 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 NPFFR2Q9Y5X5 522 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 TAF1P21675 1872 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 A8MVM7 634 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 FASLGP48023 281 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 KCNJ10P78508 379 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF367Q7RTV3 350 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
PRPF38A-201ENST00000257181 POMPQ9Y244 141 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms