RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TNFSF11O14788 317 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 PEX11AO75192 247 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 LYPLA1O75608 230 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 PABPC4LP0CB38 370 aaKnown RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 CARD18P57730 90 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 LSM12Q3MHD2 195 aaKnown RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 ATP6AP1LQ52LC2 224 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 Q5PR19 223 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 HBMQ6B0K9 141 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 PRSS57Q6UWY2 283 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 BEND4Q6ZU67 534 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 C22orf34Q6ZV56 151 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 LILRA2Q8N149 483 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 ZNF527Q8NB42 609 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 OR7A2PQ8NGA2 310 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 ADAMTS15Q8TE58 950 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 OR5P2Q8WZ92 322 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 OSTF1Q92882 214 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 OTUB1Q96FW1 271 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 PRPF18Q99633 342 aaKnown RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 NPAS1Q99742 590 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 ACTRT3Q9BYD9 372 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 ZNF395Q9H8N7 513 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 TIGARQ9NQ88 270 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 FAM53CQ9NYF3 392 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 FAF1Q9UNN5 650 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 HEATR5AQ86XA9 2040 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 FAM171A2A8MVW0 826 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 H3BNH8 94 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 KRT16P08779 473 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 LINGO3P0C6S8 592 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 LAMP1P11279 417 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 SERPINB5P36952 375 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 CCT3P49368 545 aaKnown RBP18.84■□□□□ 0.61
NEDD8-201ENST00000250495 VSNL1P62760 191 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 LTBQ06643 244 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 CD226Q15762 336 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 BEX5Q5H9J7 111 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 CDC73Q6P1J9 531 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 STAC2Q6ZMT1 411 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 OR56A1Q8NGH5 318 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 OR2W6PQ8NHA6 318 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 POC1BQ8TC44 478 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 PHOSPHO1Q8TCT1 267 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 CDS1Q92903 461 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 REXO5Q96IC2 774 aaKnown RBP18.84■□□□□ 0.61
NEDD8-201ENST00000250495 KLHL15Q96M94 604 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 SMR3AQ99954 134 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 MECRQ9BV79 373 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 TMEM185BQ9H7F4 350 aa18.84■□□□□ 0.61
NEDD8-201ENST00000250495 LOXP28300 417 aaPredicted RBP18.83■□□□□ 0.6
NEDD8-201ENST00000250495 ADH6P28332 368 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 XKR7Q5GH72 579 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 C6orf136Q5SQH8 315 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 CLEC9AQ6UXN8 241 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 PSMA8Q8TAA3 256 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 AGR3Q8TD06 166 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 TCP10LQ8TDR4 215 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 HS3ST6Q96QI5 342 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 SLC17A7Q9P2U7 560 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 GIMAP2Q9UG22 337 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 GPR52Q9Y2T5 361 aa18.83■□□□□ 0.6
NEDD8-201ENST00000250495 GJE1A6NN92 205 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 SPAG7O75391 227 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 NUDT14O95848 222 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 THBDP07204 575 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 NUDT17P0C025 328 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 P2RX1P51575 399 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 IFFO1Q0D2I5 559 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 TP53BP2Q13625 1128 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 PTGR1Q14914 329 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 SPDYE7PQ495Y7 208 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 KLHL26Q53HC5 615 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 BEND6Q5SZJ8 279 aaPredicted RBP18.82■□□□□ 0.6
NEDD8-201ENST00000250495 IL23RQ5VWK5 629 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 PLEKHM3Q6ZWE6 761 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 FNDC5Q8NAU1 212 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 MOAP1Q96BY2 351 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 COQ8BQ96D53 544 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 BDH2Q9BUT1 245 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 ROPN1BQ9BZX4 212 aaPredicted RBP18.82■□□□□ 0.6
NEDD8-201ENST00000250495 OR10A4Q9H209 315 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 ROPN1Q9HAT0 212 aaPredicted RBP18.82■□□□□ 0.6
NEDD8-201ENST00000250495 LGALS13Q9UHV8 139 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 ROS1P08922 2347 aa18.82■□□□□ 0.6
NEDD8-201ENST00000250495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.81■□□□□ 0.6
NEDD8-201ENST00000250495 GTPBP1O00178 669 aaKnown RBP18.81■□□□□ 0.6
NEDD8-201ENST00000250495 KLF4O43474 513 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 PRPS1L1P21108 318 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ELK4P28324 431 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 SFTPDP35247 375 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ATP12AP54707 1039 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 NR1H2P55055 460 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 SUMO3P55854 103 aaPredicted RBP18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF117Q03924 483 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 TMEM201Q5SNT2 666 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ZCCHC23Q6ZST2 131 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 Q71RC1 249 aaPredicted RBP18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ROBO4Q8WZ75 1007 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 CPNE4Q96A23 557 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms