RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HOXC4P09017 264 aaPredicted RBP15.8■□□□□ 0.12
FOXA1-201ENST00000250448 CSTF1Q05048 431 aaKnown RBP15.8■□□□□ 0.12
FOXA1-201ENST00000250448 ACSM1Q08AH1 577 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 AADACL4Q5VUY2 407 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 AMER3Q8N944 861 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 SPRYD4Q8WW59 207 aaPredicted RBP15.8■□□□□ 0.12
FOXA1-201ENST00000250448 RGMAQ96B86 450 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 ORAI3Q9BRQ5 295 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 PRR14Q9BWN1 585 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 HDHD2Q9H0R4 259 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 EXTL2Q9UBQ6 330 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 TEKT2Q9UIF3 430 aa15.8■□□□□ 0.12
FOXA1-201ENST00000250448 IGKV1-8A0A0C4DH67 115 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 A0A0G2JN53 185 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 CH25HO95992 272 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 ELK1P19419 428 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 PRKAG1P54619 331 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 VASNQ6EMK4 673 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 UBE3DQ7Z6J8 389 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 OR2A1Q8NGT9 310 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 OR4Q3Q8NH05 313 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 OR52N1Q8NH53 320 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 MAFAQ8NHW3 353 aaPredicted RBP15.79■□□□□ 0.12
FOXA1-201ENST00000250448 HYLS1Q96M11 299 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 SPAG17Q6Q759 2223 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 A0A1W2PPC4 97 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 A0A1W2PQ72 361 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 NOS1APO75052 506 aaPredicted RBP15.79■□□□□ 0.12
FOXA1-201ENST00000250448 NTN1O95631 604 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 SERPIND1P05546 499 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 GNSP15586 552 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 PEBP1P30086 187 aaKnown RBP15.79■□□□□ 0.12
FOXA1-201ENST00000250448 CCR8P51685 355 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 NCBP2P52298 156 aaKnown RBP eCLIP15.79■□□□□ 0.12
FOXA1-201ENST00000250448 ATP12AP54707 1039 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 ARHGAP19Q14CB8 494 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 TRAM2Q15035 370 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 TMEM44Q2T9K0 475 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 SLC30A6Q6NXT4 461 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 ZNF761Q86XN6 746 aaPredicted RBP15.79■□□□□ 0.12
FOXA1-201ENST00000250448 CCDC28AQ8IWP9 274 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 C9orf62Q8N4C0 152 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 FBXL6Q8N531 539 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 ZNF649Q9BS31 505 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 HS3ST3A1Q9Y663 406 aa15.79■□□□□ 0.12
FOXA1-201ENST00000250448 C10orf142B7Z368 130 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 LCMT2O60294 686 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 IGHA1P01876 353 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 PTGER1P34995 402 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 CCR5P51681 352 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 BTG1P62324 171 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 YPEL5P62699 121 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 FZD2Q14332 565 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 GPR176Q14439 515 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 OR4M2Q8NGB6 313 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SHDQ96IW2 340 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 DPH7Q9BTV6 452 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 QRSL1Q9H0R6 528 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SLC23A1Q9UHI7 598 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 ADAM29Q9UKF5 820 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 LIPT1Q9Y234 373 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 EXOGQ9Y2C4 368 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SURF4O15260 269 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 HK1P19367 917 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 NTSP30990 170 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 RABIFP47224 123 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 GNA13Q14344 377 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 LASP1Q14847 261 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 BICRALQ6AI39 1079 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 TMEM91Q6ZNR0 172 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 KLBQ86Z14 1044 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SAMD14Q8IZD0 417 aaPredicted RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 LINC00469Q8N7U9 141 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 PIGXQ8TBF5 258 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 LCN9Q8WX39 176 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 ACOT12Q8WYK0 555 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SECISBP2Q96T21 854 aaKnown RBP15.78■□□□□ 0.12
FOXA1-201ENST00000250448 IER2Q9BTL4 223 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 SEMA4GQ9NTN9 838 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 DMDP11532 3685 aa15.78■□□□□ 0.12
FOXA1-201ENST00000250448 A0A0G2JPF8 293 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 CPSF4LA6NMK7 179 aaKnown RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 HNRNPCL2B2RXH8 293 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 HNRNPCL3B7ZW38 293 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 DVL2O14641 736 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 FRS3O43559 492 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 OR1F1O43749 312 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 HNRNPCL4P0DMR1 293 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 OMPP47874 163 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 DMWDQ09019 674 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 TSSK4Q6SA08 328 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 DDX31Q9H8H2 851 aaKnown RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 FOLH1BQ9HBA9 442 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 SLC35C2Q9NQQ7 365 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 LRP4O75096 1905 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 RGS9O75916 674 aaPredicted RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 PDGFBP01127 241 aaPredicted RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 WNT1P04628 370 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms