RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MBOAT2Q6ZWT7 520 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LAX1Q8IWV1 398 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 ELMOD2Q8IZ81 293 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 OR51A7Q8NH64 312 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 SMAP2Q8WU79 429 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 FGF11Q92914 225 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 C12orf4Q9NQ89 552 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 CCNKO75909 580 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 MLLT3P42568 568 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PGDP52209 483 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 CCDC85BQ15834 202 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PGGHGQ32M88 737 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 CRTC2Q53ET0 693 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 KLHL12Q53G59 568 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PDZK1Q5T2W1 519 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PLBD1Q6P4A8 553 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LINC00299Q6ZSB3 139 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LAPTM4BQ86VI4 370 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 RANBP3LQ86VV4 465 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 OR8H2Q8N162 312 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 OR51G2Q8NGK0 314 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 CNOT9Q92600 299 aaKnown RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 ANKRD9Q96BM1 317 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 MAP3K3Q99759 626 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LRRC61Q9BV99 259 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 TBC1D17Q9HA65 648 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 SMURF1Q9HCE7 757 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 ANKHQ9HCJ1 492 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 HINT3Q9NQE9 182 aaKnown RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 NDUFB11Q9NX14 153 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 SEC14L4Q9UDX3 406 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 DTX4Q9Y2E6 619 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PEX16Q9Y5Y5 336 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 TRAV27A0A087WT01 109 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LOC110117498-PIK3R3F6TDL0 507 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 OR5F1O95221 314 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 KRT8P05787 483 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 SAGP10523 405 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 FPR3P25089 353 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 TNFSF8P32971 234 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 WNT4P56705 351 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 MLLT11Q13015 90 aaPredicted RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 KLHL22Q53GT1 634 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 KLHDC7BQ96G42 594 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 NECTIN4Q96NY8 510 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 GDF15Q99988 308 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 TMED9Q9BVK6 235 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 LYRM4Q9HD34 91 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 TXNL4BQ9NX01 149 aaKnown RBP14.62□□□□□ -0.07
LRFN1-201ENST00000248668 PCDHGB6Q9Y5F9 930 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 ENTPD2Q9Y5L3 495 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 SURF4O15260 269 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 SDC3O75056 442 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 ATP1B1P05026 303 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 LIMS3P0CW19 117 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 LIMS4P0CW20 117 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 BTG2P78543 158 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 HNRNPA0Q13151 305 aaKnown RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 DUSP8Q13202 625 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 LYPD8Q6UX82 237 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 RNF44Q7L0R7 432 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 VWA5B2Q8N398 1253 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 CAMKK1Q8N5S9 505 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 CDRT4Q8N9R6 151 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 OR13C2Q8NGS9 318 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 OSTF1Q92882 214 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 DCLRE1CQ96SD1 692 aaKnown RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 SMAD5Q99717 465 aaKnown RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 PRSS27Q9BQR3 290 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 NXF2Q9GZY0 626 aaKnown RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 OR52D1Q9H346 318 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 NTMQ9P121 344 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 CA14Q9ULX7 337 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 AGR2O95994 175 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 SDC2P34741 201 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 POU6F2P78424 691 aaPredicted RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 MGAT2Q10469 447 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 NDUFAF6Q330K2 333 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 DESI1Q6ICB0 168 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 GJD3Q8N144 294 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 NLGN4YQ8NFZ3 816 aaPredicted RBP14.61□□□□□ -0.07
LRFN1-201ENST00000248668 TP53INP1Q96A56 240 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 UBQLN3Q9H347 655 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 PLSCR3Q9NRY6 295 aa14.61□□□□□ -0.07
LRFN1-201ENST00000248668 KIR2DS5A0A0G2JLQ3 304 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 A0A0G2JNG1 304 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 LOC105371267A0A1B0GV96 52 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 SLC35F4A4IF30 521 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 TRAPPC13A5PLN9 417 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 TGFBR3LH3BV60 316 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 KIR2DS3K7RE56 304 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 ADAM11O75078 769 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CBX7O95931 251 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 ZGLP1P0C6A0 271 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 NID1P14543 1247 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 KIR2DS5Q14953 304 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 MINDY4Q4G0A6 757 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 SPERTQ8NA61 448 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 POGLUT1Q8NBL1 392 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 OR2T33Q8NG76 320 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms