RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FYTTD1Q96QD9 318 aaKnown RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 OR2A5Q96R48 311 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TBX5Q99593 518 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 JAM3Q9BX67 310 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ADAP2Q9NPF8 381 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ATP13A2Q9NQ11 1180 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 C20orf141Q9NUB4 165 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 FBXO34Q9NWN3 711 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SZT2Q5T011 3432 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NPIPA5A0A0B4J1W7 369 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TRAPPC13A5PLN9 417 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NPIPA7E9PJI5 369 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 H0Y8X5 98 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 YES1P07947 543 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 THBS1P07996 1170 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NPIPA8P0DM63 369 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 CPMP14384 443 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 MAP2K3P46734 347 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ARPC4P59998 168 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 MRPL2Q5T653 305 aaKnown RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NIPAL3Q6P499 406 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 METAP1DQ6UB28 335 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 USP53Q70EK8 1073 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 GID4Q8IVV7 300 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 RIPOR3Q96MK2 946 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 HCAR1Q9BXC0 346 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF350Q9GZX5 532 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 PIGUQ9H490 435 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 SLA2Q9H6Q3 261 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF223Q9UK11 482 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TNFRSF10AO00220 468 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 PEX12O00623 359 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 BHLHE40O14503 412 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 RNF13O43567 381 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 B3GALT2O43825 422 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 LDB3O75112 727 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 PSKH1P11801 424 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 IFI30P13284 250 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NDUFS1P28331 727 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TLX1P31314 330 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 CTHP32929 405 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 OR1Q1Q15612 314 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 PRRT3Q5FWE3 981 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 DCST2Q5T1A1 773 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 NOXA1Q86UR1 476 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF619Q8N2I2 560 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ACBD7Q8N6N7 88 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM99Q8N816 258 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 OR52L1Q8NGH7 329 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TSACCQ96A04 125 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 CD180Q99467 661 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 ALG8Q9BVK2 526 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 TRPV5Q9NQA5 729 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 RPRD1BQ9NQG5 326 aaKnown RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 KCNE5Q9UJ90 142 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 SLC22A7Q9Y694 548 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 SIRT4Q9Y6E7 314 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-202ENST00000244303 MAU2Q9Y6X3 613 aa13.36□□□□□ -0.27
HIF3A-202ENST00000244303 GTPBP1O00178 669 aaKnown RBP13.35□□□□□ -0.27
HIF3A-202ENST00000244303 ALX3O95076 343 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 CHRNB1P11230 501 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 PRKCAP17252 672 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 ACTR1BP42025 376 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 ACTR1AP61163 376 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 CD83Q01151 205 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 FHL5Q5TD97 284 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 FCRL6Q6DN72 434 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 MZT2AQ6P582 158 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 MEPCEQ7L2J0 689 aaKnown RBP13.35□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF438Q7Z4V0 828 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 NR2C2APQ86WQ0 139 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 GRPEL2Q8TAA5 225 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 SLC22A18Q96BI1 424 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 ARSGQ96EG1 525 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 TIMP4Q99727 224 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 C19orf53Q9UNZ5 99 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-202ENST00000244303 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
HIF3A-202ENST00000244303 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
HIF3A-202ENST00000244303 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 HRO43593 1189 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 STX11O75558 287 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms