RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TSPYL5Q86VY4 417 aaPredicted RBP7.09□□□□□ -1.28
RIF1-201ENST00000243326 DHRS4Q9BTZ2 278 aa7.09□□□□□ -1.28
RIF1-201ENST00000243326 RETREG1Q9H6L5 497 aa7.09□□□□□ -1.28
RIF1-201ENST00000243326 MAGIXQ9H6Y5 334 aa7.09□□□□□ -1.28
RIF1-201ENST00000243326 TNFRSF10AO00220 468 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM225BP0DP42 221 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM44Q2T9K0 475 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CTSL3PQ5NE16 218 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 FAM69BQ5VUD6 431 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR5H2Q8NGV7 314 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 INTS14Q96SY0 518 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GABRR3A8MPY1 467 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GPR32O75388 356 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CDK10Q15131 360 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 LYSMD2Q8IV50 215 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 POP5Q969H6 163 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 FKRPQ9H9S5 495 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 DCAF13Q9NV06 445 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 IL33O95760 270 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GABRB3P28472 473 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM88Q6PEY1 159 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 USP50Q70EL3 339 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 NLRC3Q7RTR2 1065 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 DNAAF1Q8NEP3 725 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 LGALS14Q8TCE9 139 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 KHSRPQ92945 711 aaKnown RBP eCLIP7.08□□□□□ -1.282e-7■■■■□ 19.9
RIF1-201ENST00000243326 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 VDAC3Q9Y277 283 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MED19A0JLT2 244 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 HYAL3O43820 417 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 PVRP15151 417 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 IL4RP24394 825 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 VASPP50552 380 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 CLDN8P56748 225 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 UPP1Q16831 310 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 NECAP1Q8NC96 275 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR13C5Q8NGS8 318 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GLYATL1Q969I3 302 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TGM7Q96PF1 710 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 FAM234AQ9H0X4 552 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CPNE5Q9HCH3 593 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 FLVCR2Q9UPI3 526 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR52A4PA6NMU1 304 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF28P17035 718 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 HOXB6P17509 224 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 S100PP25815 95 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 RAB33AQ14088 237 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 YIF1BQ5BJH7 314 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 RNASE10Q5GAN6 216 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 SLC35D2Q76EJ3 337 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 FCRLAQ7L513 359 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 SUMF2Q8NBJ7 301 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ELP5Q8TE02 316 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 HRASLS2Q9NWW9 162 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 A0A1W2PP55 124 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 EMC8O43402 210 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PRKYO43930 277 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 SC5DO75845 299 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 NPPAP01160 153 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PRSS3P35030 304 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF783Q6ZMS7 281 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MISPQ8IVT2 679 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR51T1Q8NGJ9 327 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 R3HDMLQ9H3Y0 253 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ACSL5Q9ULC5 683 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 EBPQ15125 230 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF705AQ6ZN79 300 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM126BQ8IUX1 230 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 LILRA3Q8N6C8 439 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF436Q9C0F3 470 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 WWTR1Q9GZV5 400 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PCBD2Q9H0N5 130 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ALPLP05186 524 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF888P0CJ79 500 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 NAT1P18440 290 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 NUDT1P36639 197 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GCDHQ92947 438 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 ERVW-1Q9UQF0 538 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PARP4Q9UKK3 1724 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 NUDT21O43809 227 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 SLC2A10O95528 541 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CARD18P57730 90 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR1F2PQ96R84 312 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CDHR4A6H8M9 788 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 GMDSO60547 372 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ERCC1P07992 297 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 OR8G3PP0DMU2 310 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ARRB2P32121 409 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 SFTPDP35247 375 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 CXCR4P61073 352 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 DECR1Q16698 335 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM64Q6YI46 380 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TMEM135Q86UB9 458 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MKS1Q9NXB0 559 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PCDHGB1Q9Y5G3 927 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 PRKNO60260 465 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 EIF5AP63241 154 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 DPY19L2P1Q6NXN4 242 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MAMDC4Q6UXC1 1216 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF852Q6ZMS4 543 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms