RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 CROCCP3Q8IVE0 287 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 SLC15A4Q8N697 577 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 NANOGP1Q8N7R0 232 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 ANKK1Q8NFD2 765 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 DTNBP1Q96EV8 351 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 VMP1Q96GC9 406 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 OPALINQ96PE5 141 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PHOX2BQ99453 314 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 NUDT22Q9BRQ3 303 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 TAPBPLQ9BX59 468 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PRRG3Q9BZD7 231 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 ZBTB20Q9HC78 741 aaPredicted RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 HHATLQ9HCP6 504 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 IGKV3D-11A0A0A0MRZ8 115 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 A0A1B0GWA3 101 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 TTC36A6NLP5 189 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 IFI30P13284 250 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 OPRL1P41146 370 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 SSX1Q16384 188 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PAQR6Q6TCH4 344 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 ZNF321PQ8N8H1 164 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PROKR2Q8NFJ6 384 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 OR7G1Q8NGA0 311 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 OR4C3Q8NH37 302 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 BRIX1Q8TDN6 353 aaKnown RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 GRHL3Q8TE85 626 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 TSLPQ969D9 159 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 BORCS5Q969J3 196 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 SH3YL1Q96HL8 342 aaPredicted RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 SLIRPQ9GZT3 109 aaKnown RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 DCSTAMPQ9H295 470 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PNO1Q9NRX1 252 aaKnown RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PRODH2Q9UF12 536 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 OR10H1Q9Y4A9 318 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 VCANP13611 3396 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 KPNA4O00629 521 aaPredicted RBP17.05■□□□□ 0.32
HOXC11-201ENST00000243082 ARHGAP33O14559 1287 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 CHP2O43745 196 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 RAB36O95755 333 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 MSL3P1P0C860 447 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 EFNA3P52797 238 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 SLC37A1P57057 533 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 SPHARQ15513 63 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.05■□□□□ 0.32
HOXC11-201ENST00000243082 ANKDD1AQ495B1 522 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 MINDY4Q4G0A6 757 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 KLHL22Q53GT1 634 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 SOWAHCQ53LP3 525 aaPredicted RBP17.05■□□□□ 0.32
HOXC11-201ENST00000243082 AADACL4Q5VUY2 407 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 KANSL1Q7Z3B3 1105 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 KMT5CQ86Y97 462 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 LSMEM1Q8N8F7 131 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 OR2T33Q8NG76 320 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 CCDC74AQ96AQ1 378 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 MND1Q9BWT6 205 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 OR52D1Q9H346 318 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 UBQLN3Q9H347 655 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 MEPEQ9NQ76 525 aaPredicted RBP17.05■□□□□ 0.32
HOXC11-201ENST00000243082 CORINQ9Y5Q5 1042 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 CACNA1EQ15878 2313 aa17.05■□□□□ 0.32
HOXC11-201ENST00000243082 RP1P56715 2156 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 CCRL2O00421 344 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 PRKNO60260 465 aaPredicted RBP17.04■□□□□ 0.32
HOXC11-201ENST00000243082 RFPL3O75679 317 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
HOXC11-201ENST00000243082 SCG5P05408 212 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 HBQ1P09105 142 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 TBXA2RP21731 343 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 CTBP2P56545 445 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 RAB40BQ12829 278 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 DSG2Q14126 1118 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 QSOX2Q6ZRP7 698 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 LINC00299Q6ZSB3 139 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 TMPRSS11FQ6ZWK6 438 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 GATAD2AQ86YP4 633 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 GPR135Q8IZ08 494 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 CYP4Z2PQ8N1L4 340 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 SLC35B4Q969S0 331 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 BPIFA2Q96DR5 249 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 RNFT2Q96EX2 444 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 LMF1Q96S06 567 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 NDC1Q9BTX1 674 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 ZNF426Q9BUY5 554 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 TRIM2Q9C040 744 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 ENKD1Q9H0I2 346 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 RNF167Q9H6Y7 350 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 FGF20Q9NP95 211 aaPredicted RBP17.04■□□□□ 0.32
HOXC11-201ENST00000243082 MED17Q9NVC6 651 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 MED31Q9Y3C7 131 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 A8MUA0 341 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 SLC2A10O95528 541 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 EPHA8P29322 1005 aaPredicted RBP17.04■□□□□ 0.32
HOXC11-201ENST00000243082 ETV5P41161 510 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 ETV1P50549 477 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
HOXC11-201ENST00000243082 TUBA1BP68363 451 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 ZSWIM7Q19AV6 140 aa17.04■□□□□ 0.32
HOXC11-201ENST00000243082 PMS2CLQ68D20 193 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms