RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SLC46A1Q96NT5 459 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 FGF21Q9NSA1 209 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 PILRBQ9UKJ0 227 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 KDM4EB2RXH2 506 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 HYAL3O43820 417 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 IFI30P13284 250 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 MYF5P13349 255 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 TUBA1BP68363 451 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 RAB40BQ12829 278 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 NR0B2Q15466 257 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 SLC30A6Q6NXT4 461 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 TMEM71Q6P5X7 295 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 TMPRSS11FQ6ZWK6 438 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 TUBA1AQ71U36 451 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 SLCO6A1Q86UG4 719 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 TMEM151BQ8IW70 566 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 PROKR2Q8NFJ6 384 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 OR52L1Q8NGH7 329 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 ZNF501Q96CX3 271 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 HOXD1Q9GZZ0 328 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 SIDT1Q9NXL6 827 aaKnown RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 CLCA3PQ9Y6N3 262 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 SYNDIG1LA6NDD5 238 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 CDC42EP2O14613 210 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 SURF4O15260 269 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 RORAP35398 523 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 UGT2B10P36537 528 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 CTBP2P56545 445 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 SQSTM1Q13501 440 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 C1DQ13901 141 aaKnown RBP21.47■■□□□ 1.03
MSX2-201ENST00000239243 ELAVL1Q15717 326 aaKnown RBP21.47■■□□□ 1.03
MSX2-201ENST00000239243 KANSL1Q7Z3B3 1105 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 ANKK1Q8NFD2 765 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 OR4Q3Q8NH05 313 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 OR4C6Q8NH72 309 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 DYNC2LI1Q8TCX1 351 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.47■■□□□ 1.03
MSX2-201ENST00000239243 RPL3LQ92901 407 aaKnown RBP21.47■■□□□ 1.03
MSX2-201ENST00000239243 BORCS5Q969J3 196 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 OR5M11Q96RB7 305 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 NUDT22Q9BRQ3 303 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 CCRL2O00421 344 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 RCBTB2O95199 551 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 ADRA2AP08913 450 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 INHBBP09529 407 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 BMP7P18075 431 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 GADD45AP24522 165 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 ACAA2P42765 397 aaKnown RBP21.47■■□□□ 1.03
MSX2-201ENST00000239243 PPICP45877 212 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 SLC37A1P57057 533 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 NNATQ16517 81 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 BMP8AQ7Z5Y6 402 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 FANK1Q8TC84 345 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 ART5Q96L15 291 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 DPYSL5Q9BPU6 564 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 DPH1Q9BZG8 443 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 SRPK3Q9UPE1 567 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 SLC35A3Q9Y2D2 325 aa21.47■■□□□ 1.03
MSX2-201ENST00000239243 A0A1B0GWA3 101 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 EFCAB7A8K855 629 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 MYL12BO14950 172 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 YKT6O15498 198 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 FOXD2O60548 495 aaPredicted RBP21.46■■□□□ 1.03
MSX2-201ENST00000239243 ARHGAP40Q5TG30 622 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 ZNF440Q8IYI8 595 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 NANOGP1Q8N7R0 232 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 OR52I1Q8NGK6 324 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 PFN4Q8NHR9 129 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 GRHL3Q8TE85 626 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 BPIFA2Q96DR5 249 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 OR52D1Q9H346 318 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 MRTO4Q9UKD2 239 aaKnown RBP21.46■■□□□ 1.03
MSX2-201ENST00000239243 CACNA1EQ15878 2313 aa21.46■■□□□ 1.03
MSX2-201ENST00000239243 NUP210LQ5VU65 1888 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 SERINC4A6NH21 518 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 SPHARQ15513 63 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 ALG10BQ5I7T1 473 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 C3orf38Q5JPI3 329 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 USP43Q70EL4 1123 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 ADCK1Q86TW2 530 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 GATAD2AQ86YP4 633 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 SLITRK4Q8IW52 837 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 ZNF527Q8NB42 609 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 VMP1Q96GC9 406 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 SAMD8Q96LT4 415 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 HHATLQ9HCP6 504 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 CHCHD3Q9NX63 227 aaKnown RBP21.45■■□□□ 1.03
MSX2-201ENST00000239243 FLRT3Q9NZU0 649 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 RPS6KB2Q9UBS0 482 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 GPR52Q9Y2T5 361 aa21.45■■□□□ 1.03
MSX2-201ENST00000239243 LSM2Q9Y333 95 aaKnown RBP21.45■■□□□ 1.03
MSX2-201ENST00000239243 TNRC6BQ9UPQ9 1833 aaKnown RBP21.45■■□□□ 1.02
MSX2-201ENST00000239243 TCRBV16S1A1N1A0A5B0 115 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 LAMTOR5O43504 91 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 NADKO95544 446 aaPredicted RBP21.45■■□□□ 1.02
MSX2-201ENST00000239243 CSTAP01040 98 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 SCG5P05408 212 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 TDGF1P13385 188 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 MYL12AP19105 171 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 MTNR1AP48039 350 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms