RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CRYZQ08257 329 aaKnown RBP14.43□□□□□ -0.1
DDX55-201ENST00000238146 PRPF38BQ5VTL8 546 aaKnown RBP14.43□□□□□ -0.1
DDX55-201ENST00000238146 RPTNQ6XPR3 784 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 C16orf62Q7Z3J2 963 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 FGD2Q7Z6J4 655 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 ARRDC3Q96B67 414 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 MOAP1Q96BY2 351 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 NDC1Q9BTX1 674 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 BEX1Q9HBH7 125 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 KCMF1Q9P0J7 381 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 WNT6Q9Y6F9 365 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 PQBP1O60828 265 aaKnown RBP14.43□□□□□ -0.1
DDX55-201ENST00000238146 HPXP02790 462 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 UGT2B7P16662 529 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 NAT1P18440 290 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 ACVR1BP36896 505 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 HSD17B2P37059 387 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 PDX1P52945 283 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 ARFIP1P53367 373 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 C18orf63Q68DL7 685 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 ESPNLQ6ZVH7 1005 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 GRAMD2AQ8IUY3 354 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 GALNT11Q8NCW6 608 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 OR2T35Q8NGX2 323 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 OR51Q1Q8NH59 317 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 RPLP0P6Q8NHW5 317 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 BRIX1Q8TDN6 353 aaKnown RBP14.43□□□□□ -0.1
DDX55-201ENST00000238146 PTP4A1Q93096 173 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 RADILQ96JH8 1075 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 PGLYRP3Q96LB9 341 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 C1QTNF2Q9BXJ5 285 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 DPH1Q9BZG8 443 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 FN3KQ9H479 309 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 CALML5Q9NZT1 146 aa14.43□□□□□ -0.1
DDX55-201ENST00000238146 BHLHE40O14503 412 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 TOXO94900 526 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 AIFM1O95831 613 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 WNT1P04628 370 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 SNRPBP14678 240 aaKnown RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 RAB3BP20337 219 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 DRD5P21918 477 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 PTGS2P35354 604 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 SNTB2Q13425 540 aaKnown RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 AGERQ15109 404 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 TRAM1Q15629 374 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ACSM3Q53FZ2 586 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 MTFR2Q6P444 385 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 HDDC2Q7Z4H3 204 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 CDH24Q86UP0 819 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 CMIPQ8IY22 773 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ARMC5Q96C12 935 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ELP4Q96EB1 424 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 C4orf36Q96KX1 117 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.42□□□□□ -0.1
DDX55-201ENST00000238146 CES1P1Q9UKY3 287 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 NPFFR2Q9Y5X5 522 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 NPTNQ9Y639 398 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 TRABD2BA6NFA1 517 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ERI3O43414 337 aaKnown RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 HYAL3O43820 417 aaPredicted RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 MRPL3P09001 348 aaKnown RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 ATF1P18846 271 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 CSNK2A2P19784 350 aaPredicted RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 HIST1H1TP22492 207 aaPredicted RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 SELENOPP49908 381 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 TEAD2Q15562 447 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 TJAP1Q5JTD0 557 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 MRM1Q6IN84 353 aaKnown RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 SYT9Q86SS6 491 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 MS4A15Q8N5U1 240 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ACOT4Q8N9L9 421 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 OR13C5Q8NGS8 318 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 OR56B4Q8NH76 319 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 SMAP2Q8WU79 429 aaPredicted RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 THAP4Q8WY91 577 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 GSDMCQ9BYG8 508 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 GSX2Q9BZM3 304 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.42□□□□□ -0.1
DDX55-201ENST00000238146 FKBP7Q9Y680 259 aa14.42□□□□□ -0.1
DDX55-201ENST00000238146 UNC119BA6NIH7 251 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 LRRN3E7EW58 273 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 J3QLW9 94 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 RPN2P04844 631 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 ZNF19P17023 458 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 TEAD1P28347 426 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 OR12D2P58182 307 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 RAB14P61106 215 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 PITPNAQ00169 270 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 KLF9Q13886 244 aaPredicted RBP14.41□□□□□ -0.1
DDX55-201ENST00000238146 PRSS45Q7RTY3 260 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 ADGRG3Q86Y34 549 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 SLC35A4Q96G79 324 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 TEAD3Q99594 435 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 RBCK1Q9BYM8 510 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 ZNF436Q9C0F3 470 aaPredicted RBP14.41□□□□□ -0.1
DDX55-201ENST00000238146 LRRN3Q9H3W5 708 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 METTL17Q9H7H0 456 aaPredicted RBP14.41□□□□□ -0.1
DDX55-201ENST00000238146 PRDM7Q9NQW5 492 aa14.41□□□□□ -0.1
DDX55-201ENST00000238146 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms