RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 HCAR1Q9BXC0 346 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 ENKD1Q9H0I2 346 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 SCN2AQ99250 2005 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 OR6C70A6NIJ9 312 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 P2RX6O15547 441 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 LYPD3O95274 346 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 SMIM10L1P0DMW3 83 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 MAT2AP31153 395 aaKnown RBP15.12■□□□□ 0.01
LTBR-201ENST00000228918 RUNX2Q13950 521 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 PRPF38BQ5VTL8 546 aaKnown RBP15.12■□□□□ 0.01
LTBR-201ENST00000228918 ZNF619Q8N2I2 560 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 PHOSPHO2Q8TCD6 241 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 TMEM239Q8WW34 195 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 SMIM10Q96HG1 83 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 HS6ST2Q96MM7 605 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 SERINC2Q96SA4 455 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 TBX5Q99593 518 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 PIGUQ9H490 435 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 SFXN1Q9H9B4 322 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 C20orf141Q9NUB4 165 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 EXTL2Q9UBQ6 330 aa15.12■□□□□ 0.01
LTBR-201ENST00000228918 PRSS38A1L453 326 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 ERVH48-1M5A8F1 160 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 SLC43A1O75387 559 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 GKN3PP0CG01 181 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 IFI30P13284 250 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 CPMP14384 443 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 INPP1P49441 399 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 CSTF1Q05048 431 aaKnown RBP15.11■□□□□ 0.01
LTBR-201ENST00000228918 SUZ12Q15022 739 aaKnown RBP15.11■□□□□ 0.01
LTBR-201ENST00000228918 OR1Q1Q15612 314 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 DEFB134Q4QY38 66 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 MRPL2Q5T653 305 aaKnown RBP15.11■□□□□ 0.01
LTBR-201ENST00000228918 IDNKQ5T6J7 187 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 FHL5Q5TD97 284 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 FBXO42Q6P3S6 717 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 USP53Q70EK8 1073 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 RNF113BQ8IZP6 322 aaKnown RBP15.11■□□□□ 0.01
LTBR-201ENST00000228918 LNX2Q8N448 690 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 TM4SF19Q96DZ7 209 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 C1QTNF7Q9BXJ2 289 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 IRF2BPLQ9H1B7 796 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 ATP13A2Q9NQ11 1180 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 TRIM36Q9NQ86 728 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 TMEM74BQ9NUR3 256 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 DAPP1Q9UN19 280 aa15.11■□□□□ 0.01
LTBR-201ENST00000228918 DOCK8Q8NF50 2099 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 LOC102723532A0A0G2JNH3 316 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 HRO43593 1189 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 DNAJB6O75190 326 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 DBIP07108 87 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 BMP7P18075 431 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 ERP29P30040 261 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 FAPQ12884 760 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 TCEA2Q15560 299 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 TRMT12Q53H54 448 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 EXOSC6Q5RKV6 272 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 DCST2Q5T1A1 773 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 OR5M3Q8NGP4 307 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 FLVCR1-AS1Q8TAF5 88 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 FAM131CQ96AQ9 280 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 MKRN2Q9H000 416 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 ACOXLQ9NUZ1 547 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 CLDND1Q9NY35 253 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 C19orf53Q9UNZ5 99 aaPredicted RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 A0A0G2JMP0 313 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 A0A0X1KG70 313 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 ORC5O43913 435 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 NID1P14543 1247 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 NDUFS1P28331 727 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 ADPRHP54922 357 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 GALEQ14376 348 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 ZNF57Q68EA5 555 aaPredicted RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 LRRC28Q86X40 367 aaPredicted RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 IQCF2Q8IXL9 164 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 SPERTQ8NA61 448 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 OR4M2Q8NGB6 313 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 ZFAND1Q8TCF1 268 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 TTC9Q92623 222 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 AHCYL2Q96HN2 611 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 OR2A5Q96R48 311 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 WACQ9BTA9 647 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 PPIL3Q9H2H8 161 aaKnown RBP15.1■□□□□ 0.01
LTBR-201ENST00000228918 CMC2Q9NRP2 79 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 INPP5EQ9NRR6 644 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 CYSLTR2Q9NS75 346 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 KCNE5Q9UJ90 142 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 SLC22A7Q9Y694 548 aa15.1■□□□□ 0.01
LTBR-201ENST00000228918 DAPL1A0PJW8 107 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 PEX12O00623 359 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 SLC31A1O15431 190 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 B3GALT2O43825 422 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 STX11O75558 287 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 ARSBP15848 533 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 AK4P27144 223 aaPredicted RBP15.09■□□□□ 0.01
LTBR-201ENST00000228918 THBS2P35442 1172 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 GZMKP49863 264 aa15.09■□□□□ 0.01
LTBR-201ENST00000228918 DBPQ10586 325 aaPredicted RBP15.09■□□□□ 0.01
LTBR-201ENST00000228918 KLHL12Q53G59 568 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms